common-workflow-library / cwl-patternsLinks
Patterns commonly encountered when writing CWL workflows
☆26Updated 3 years ago
Alternatives and similar repositories for cwl-patterns
Users that are interested in cwl-patterns are comparing it to the libraries listed below
Sorting:
- A language server for Common Workflow Language☆65Updated last year
- A web application to view and share Common Workflow Language workflows☆46Updated last week
- Python utilities for CWL☆39Updated last week
- The WES API is a standard way to run and manage portable workflows.☆85Updated last week
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- biotoolsregistry : discovery portal for bioinformatics☆79Updated last week
- Workflow Execution Service Backend☆18Updated this week
- Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.☆24Updated last year
- EDAM is a domain ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises c…☆124Updated 3 months ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 9 months ago
- ☆88Updated 2 months ago
- A translator from WDL to CWL v1.2☆27Updated last week
- biotoolsSchema : Tool description data model for computational tools in life sciences☆39Updated last year
- Big Data Bag Utilities☆50Updated last month
- BioThings API framework - Making high-performance API for biological annotation data☆47Updated this week
- A Python library for interacting with the Galaxy API☆93Updated 2 weeks ago
- API for linked biological knowledge☆65Updated 3 years ago
- An app store for scientific workflows, tools, notebooks, and services☆127Updated this week
- For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.☆89Updated last week
- WDL plugin for pytest☆48Updated 2 years ago
- Feature Annotation Location Description Ontology☆34Updated 5 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Updated last week
- A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide☆11Updated this week
- Seven Bridges Python library for programatic generation of CWL workflows.☆20Updated 2 years ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 2 months ago
- Released CWL v1.2.1 specification☆37Updated 4 months ago
- This repo is for the metadata schemas associated with the HCA☆67Updated 2 weeks ago
- ☆18Updated last month
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆23Updated 4 years ago
- KnetMiner - webapp to search and visualize genome-scale knowledge graphs☆29Updated last week