sbg / sevenbridges-cwlLinks
Seven Bridges Python library for programatic generation of CWL workflows.
☆20Updated 3 years ago
Alternatives and similar repositories for sevenbridges-cwl
Users that are interested in sevenbridges-cwl are comparing it to the libraries listed below
Sorting:
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆34Updated 5 months ago
- A translator from WDL to CWL v1.2☆27Updated last week
- Bioinformatics workflows developed for and used on the St. Jude Cloud project.☆38Updated last week
- Workflow Execution Service Backend☆20Updated this week
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago
- CWL experimental grammar☆11Updated 2 years ago
- SeqPlots - An interactive tool for visualizing NGS signals and sequence motif densities along genomic features using average plots and he…☆87Updated 3 years ago
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆78Updated 7 months ago
- A data processing platform for ChIP-seq, RNA-seq, MNase-seq, DNase-seq, ATAC-seq and GRO-seq datasets. Please ignore information on ciphe…☆19Updated 7 years ago
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Updated 5 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- ☆92Updated last month
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated last week
- SevenBridges Python Api bindings☆46Updated 9 months ago
- Nozzle is a report generation toolkit for data analysis pipelines implemented in R.☆67Updated 9 years ago
- Next generation sequencing (NGS/HTS) tools.☆19Updated last year
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆36Updated 3 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- BioContainers specifications☆52Updated 2 years ago
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Updated 4 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Updated 3 months ago
- Consensus assembly and variant calling workflow.☆12Updated 10 years ago
- Request for comments on interchangeable bioinformatics containers☆39Updated 6 years ago
- Workflow Description Language - Specification and Implementations☆27Updated 6 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- WDL plugin for pytest☆48Updated 2 years ago