A workflow assembler for cancer genome analytics and informatics
☆19Nov 16, 2016Updated 9 years ago
Alternatives and similar repositories for kronos
Users that are interested in kronos are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆43Apr 20, 2016Updated 10 years ago
- GenoTypes Compressor☆16May 19, 2022Updated 4 years ago
- ☆36Aug 13, 2020Updated 6 years ago
- Toil workflows for common genomic pipelines☆33Oct 3, 2019Updated 6 years ago
- ☆15Mar 7, 2016Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The gkno launcher for executing tools or pipelines☆31Jan 17, 2017Updated 9 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11May 2, 2017Updated 9 years ago
- Genomics database manager☆25Mar 3, 2014Updated 12 years ago
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 11 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Aug 8, 2024Updated 2 years ago
- normalize, left-align, trim, validate and clean VCF files☆20Jul 22, 2015Updated 11 years ago
- variant integration methods for the 1000 Genomes Project☆21Jan 16, 2018Updated 8 years ago
- Copy number estimation of highly duplicated sequences☆10Aug 15, 2017Updated 9 years ago
- ☆12Feb 19, 2017Updated 9 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Fast Structural Variation Detection Toolbox☆19Feb 16, 2015Updated 11 years ago
- extract SV signal from a BAM☆10Jul 26, 2018Updated 8 years ago
- Curated collection of open-source bioinformatics tools☆27Feb 5, 2019Updated 7 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- Novel Adjacency Identification with Barcoded Reads☆13Apr 19, 2022Updated 4 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 9 years ago
- Assemble the Genome in a Bottle sequencing data☆10Aug 4, 2017Updated 9 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Jun 4, 2024Updated 2 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Jan 19, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data☆14Apr 1, 2018Updated 8 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- A novel pipeline framework to accelerate bioinformatics analysis☆31Oct 5, 2025Updated 10 months ago
- Tool for the Automation of Cleanup and Analyses: tools for projects and data management at NGI Stockholm☆14Jun 26, 2026Updated last month
- A support vector machine for calling variants from next-gen sequencing data☆15Dec 12, 2013Updated 12 years ago
- ☆13Jun 21, 2017Updated 9 years ago
- Population-scale detection of novel sequence insertions☆28Aug 16, 2022Updated 4 years ago
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Mar 7, 2014Updated 12 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Deprecated, see https://labsyspharm.github.io/rnaseq/☆12Feb 28, 2019Updated 7 years ago
- A Vagrant/Docker/Virtualbox/Ansible powered vim-based development environment for python.☆13Aug 11, 2016Updated 10 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Jan 4, 2018Updated 8 years ago
- ☆16Apr 29, 2024Updated 2 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37May 18, 2022Updated 4 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50May 8, 2026Updated 3 months ago