blachlylab / mucor
☆12Updated 8 years ago
Alternatives and similar repositories for mucor:
Users that are interested in mucor are comparing it to the libraries listed below
- Graphical assessment of structrial variants using 10x genomics data☆10Updated 8 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Updated 7 years ago
- An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data☆14Updated 7 years ago
- Novel Adjacency Identification with Barcoded Reads☆13Updated 3 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- robust matching of small variant datasets using flexible scoring schemes☆10Updated 5 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 4 months ago
- What's The Function of these genes?☆22Updated 8 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆17Updated 6 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Hemang Parikh☆11Updated 9 years ago
- GenoTypes Compressor☆15Updated 2 years ago
- ☆15Updated 9 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Updated 6 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Updated 9 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- commandline manipulation of genomic variants and NGS reads☆19Updated 8 months ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- A configurable de novo assembly pipeline☆28Updated 8 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Updated 3 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- Copy number estimation of highly duplicated sequences☆10Updated 7 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago
- vcf file manipulation☆21Updated 9 years ago
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago
- laSV is a software package that employs local assembly to detect structural variations from whole-genome high-throughput sequencing datas…☆12Updated 8 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- probability of mendelian error in trios.☆11Updated 9 years ago