Consonance / consonance
Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows
☆14Updated 6 years ago
Alternatives and similar repositories for consonance:
Users that are interested in consonance are comparing it to the libraries listed below
- normalize, left-align, trim, validate and clean VCF files☆20Updated 9 years ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Generic pipeline system☆23Updated 6 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Updated 9 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆22Updated 3 months ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- Consensus assembly and variant calling workflow.☆12Updated 9 years ago
- Server wrapper that turns command line tools into web services☆61Updated 6 years ago
- Convert CWL to WDL☆17Updated 8 years ago
- a wee tool for random access into BGZF files.☆84Updated 6 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bu…☆30Updated last week
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆32Updated last month
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Updated 4 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 4 months ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- Awesome resources related to Galaxy project☆12Updated 5 months ago
- Generate and process BAM files from Illumina sequencing instrument files☆23Updated 9 years ago
- a place for GA4GH-related wiki pages☆16Updated 7 years ago
- robust matching of small variant datasets using flexible scoring schemes☆10Updated 5 years ago
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Updated 5 years ago
- WDL plugin for pytest☆48Updated last year
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated last week
- WDL tools for parsing, type-checking, and more☆25Updated 2 weeks ago
- APIs for discovering genomics tools, their metadata and their containers☆31Updated 5 months ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago