rqtl / qtl2Links
QTL analysis software for high-dimensional data and complex cross designs
☆34Updated 3 weeks ago
Alternatives and similar repositories for qtl2
Users that are interested in qtl2 are comparing it to the libraries listed below
Sorting:
- Genomic plot in trellis layout☆40Updated last year
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- Glimma R package☆50Updated 9 months ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- Effective Computing—Resources for Computational Biologists☆26Updated 5 years ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆38Updated 6 months ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆34Updated 7 years ago
- ☆29Updated 11 months ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 7 months ago
- ☆16Updated 6 years ago
- Make rapid visualizations of RNA-seq data in R☆19Updated 5 years ago
- ☆22Updated 8 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- tools to efficiently retrieve and calculate LD☆33Updated 3 years ago
- Summer school course materials collection☆26Updated 6 years ago
- ☆30Updated 3 years ago
- ☆21Updated 9 months ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 5 months ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Population-based detection of structural variation from High-Throughput Sequencing.☆31Updated 2 years ago
- UCSC liftOver (genome build converter) for vcf format☆12Updated 7 years ago
- a set of NGS pipelines☆24Updated this week
- R package for genomic feature analysis and visualization☆79Updated 2 months ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Updated 9 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆40Updated last year
- ☆21Updated 2 years ago
- Integrative analysis of structural variations.☆40Updated last year
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 8 months ago