augusto-garcia / onemapLinks
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
☆38Updated 2 years ago
Alternatives and similar repositories for onemap
Users that are interested in onemap are comparing it to the libraries listed below
Sorting:
- ☆45Updated 10 months ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 5 months ago
- ☆11Updated 3 years ago
- ☆31Updated 2 weeks ago
- ☆15Updated 5 years ago
- Genetic maps in autopolyploids☆31Updated last week
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Updated 8 years ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆23Updated last year
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 3 years ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆25Updated 5 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- An R interface for the ADMIXTOOLS software☆34Updated last month
- ☆21Updated 2 years ago
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- The powerful `awk` script to calculate pi, Dxy and Fst in polyploid VCF files with mixed-ploidy groups support☆31Updated last month
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Updated 10 months ago
- Software for ancestry estimation in unrelated individuals☆22Updated last week
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆44Updated 6 years ago
- Population assignment analysis using R☆15Updated 6 months ago
- ☆17Updated 10 years ago
- Genome-wide de novo genotyping with 2bRAD☆23Updated 7 months ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- Two locus likelihoods and ARGs under changing population size☆14Updated last month
- An Efficient Swiss Army Knife for Population Genomic Analyses in R☆38Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆69Updated 2 months ago