augusto-garcia / onemapLinks
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
☆38Updated 2 years ago
Alternatives and similar repositories for onemap
Users that are interested in onemap are comparing it to the libraries listed below
Sorting:
- ☆45Updated 9 months ago
- ☆31Updated last week
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- Genetic maps in autopolyploids☆31Updated this week
- ☆15Updated 5 years ago
- An R interface for the ADMIXTOOLS software☆34Updated last month
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 5 months ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- ☆11Updated 3 years ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Updated 8 years ago
- Genome-wide de novo genotyping with 2bRAD☆23Updated 7 months ago
- ☆20Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆43Updated 6 years ago
- Population Genomics in R workshop☆12Updated last year
- microhaplotype visualizer and analyzer☆20Updated 4 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated 2 months ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 3 years ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆25Updated 5 years ago
- A statistical framework for ploidy estimation using NGS short-read data☆62Updated 7 years ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Updated 5 years ago
- ☆15Updated last year
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- Software for ancestry estimation in unrelated individuals☆22Updated 3 weeks ago
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Updated 3 weeks ago
- Population assignment analysis using R☆15Updated 5 months ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Updated 10 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Updated 3 years ago