augusto-garcia / onemapLinks
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
☆38Updated last year
Alternatives and similar repositories for onemap
Users that are interested in onemap are comparing it to the libraries listed below
Sorting:
- ☆30Updated 2 weeks ago
- ☆43Updated 5 months ago
- Genetic maps in autopolyploids☆29Updated 3 months ago
- ☆15Updated 5 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- ☆11Updated 3 years ago
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆42Updated last month
- Module for analysing admixture graphs☆28Updated 7 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Updated 8 years ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆23Updated 4 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- An R package for reproducible and automated ADMIXTOOLS analyses☆33Updated 6 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- Genome-wide de novo genotyping with 2bRAD☆23Updated 3 months ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆51Updated 2 months ago
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆29Updated 10 months ago
- Population Genomics in R workshop☆12Updated last year
- Software for ancestry estimation in unrelated individuals☆20Updated last week
- ☆20Updated last year
- A program for the Maximum-likelihood analysis of population genomic data.☆29Updated 4 years ago
- ☆11Updated 10 years ago
- R-package: Calculation of haplotype blocks and libraries☆33Updated last month
- scripts and intermediate files used to annotate TEs in Jiao et al.☆35Updated 7 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- ☆14Updated last year
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆16Updated 7 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 3 years ago