riverlee / MitoSeekLinks
Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing
☆41Updated 7 years ago
Alternatives and similar repositories for MitoSeek
Users that are interested in MitoSeek are comparing it to the libraries listed below
Sorting:
- ☆51Updated 6 years ago
- A software for calculating telomere length☆73Updated 7 years ago
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- Adapters for trimming☆30Updated 6 years ago
- ☆46Updated 8 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- Python package and routines for merging VCF files☆29Updated 4 years ago
- Evolutionary Transcriptomics with R☆47Updated last week
- detection of duplications and deletions using Python based machine learning techniques☆28Updated 6 years ago
- R package for inferring copy number from read depth☆32Updated 3 years ago
- ☆78Updated 11 years ago
- Structural variant caller☆55Updated 4 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- Personal diploid genome creation and coordinate conversion☆30Updated 9 months ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- A toolkit for performing set operations - union, intersection and complement - on k-mer lists.☆34Updated 3 years ago
- *UNOFFICIAL, UNMAINTAINED and OUTDATED*: This was an unofficial archive of GMAP-GSNAP releases. Please use the original website for curr…☆33Updated 10 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Updated 8 years ago
- Pipeline for Phylostratigraphy☆13Updated 3 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Ultra-efficient taxonomic mapping of NGS data☆51Updated 4 years ago
- Evaluation of phasing performance☆23Updated 7 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- Mapped QC analysis program☆43Updated 7 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago
- ☆35Updated 4 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated 2 weeks ago
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago