Alternatives and similar repositories for MitoHPC

Users that are interested in MitoHPC are comparing it to the libraries listed below

• dpuiu / MitoHPC
  ☆14Updated last year
• jxzb1988 / MMQTL
  MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…
  ☆11Updated 2 months ago
• xihaoli / STAARpipeline-Tutorial
  The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…
  ☆30Updated 6 months ago
• mhguo1 / TRAPD
  Burden testing against public controls
  ☆50Updated last year
• ctsa / svtools
  Tools for processing and analyzing structural variants.
  ☆33Updated 9 years ago
• LappalainenLab / lorals_paper_code
  ☆26Updated 3 years ago
• deepomicslab / SpecHLA
  SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …
  ☆46Updated 2 months ago
• cortes-ciriano-lab / ReConPlot
  ☆22Updated 6 months ago
• DecodeGenetics / svimmer
  Structural variant merging tool
  ☆52Updated 10 months ago
• GeneDx / scramble
  ☆39Updated last year
• babelomics / SMAca
  SMN1 copy-number and sequence variant analysis from next generation sequencing data
  ☆23Updated 2 years ago
• mccoy-lab / MAGE
  Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…
  ☆36Updated 11 months ago
• fritzsedlazeck / parliament2
  Runs a combination of tools to generate structural variant calls on whole-genome sequencing data
  ☆47Updated 5 years ago
• guigolab / sQTLseekeR2
  R package to detect splicing QTLs (sQTLs)
  ☆12Updated last year
• hall-lab / sv-pipeline
  Pipeline for structural variation detection in cohorts
  ☆49Updated 3 years ago
• zeeev / mergeSVcallers
  heuristics to merge structural variant calls in VCF format.
  ☆36Updated 8 years ago
• WGLab / LIQA
  Long-read Isoform Quantification and Analysis
  ☆38Updated 3 months ago
• pgxcentre / region-plot
  A tool to plot significant regions of GWAS
  ☆29Updated 2 years ago
• ChrisMaherLab / ClonEvol
  ☆13Updated 7 years ago
• Shians / NanoMethViz
  ☆28Updated last month
• cphgeno / CNVbench
  Benchmarking of CNV calling tools
  ☆18Updated 6 years ago
• KolmogorovLab / minda
  ☆19Updated 2 months ago
• ENCODE-DCC / long-read-rna-pipeline
  ENCODE long read RNA-seq pipeline
  ☆48Updated 2 years ago
• adamewing / tldr
  Identify and annotate TE-mediated insertions in long-read sequence data
  ☆42Updated last week
• AmpliconSuite / CoRAL
  Reconstruction of focal amplifications with long reads
  ☆21Updated last week
• twlab / TEProf2Paper
  TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
  ☆24Updated 2 years ago
• deLaatLab / pipe4C
  4C-seq processing pipeline
  ☆23Updated 3 months ago
• francois-a / fastqtl
  Enhanced version of the FastQTL QTL mapper
  ☆66Updated 2 years ago
• nloyfer / UXM_deconv
  ☆43Updated 2 years ago
• mortazavilab / cerberus
  ☆19Updated 10 months ago