a tool for predicting mitochondrial DNA deletions using soft-clipping
☆23Feb 3, 2022Updated 4 years ago
Alternatives and similar repositories for eKLIPse
Users that are interested in eKLIPse are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Apr 10, 2024Updated 2 years ago
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- ☆14Oct 29, 2021Updated 4 years ago
- A bioinformatics pipeline to analyze mtDNA from NGS data☆98Mar 5, 2024Updated 2 years ago
- ☆16Jan 5, 2018Updated 8 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- phy-mer☆11Oct 12, 2017Updated 8 years ago
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago
- A Mendelian approach to variant effect prediction built in keras☆20Nov 3, 2025Updated 7 months ago
- This repo is be archived, these workflows are still housed housed in the GATK repository under the scripts directory. The workflows are a…☆22Mar 9, 2020Updated 6 years ago
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆17Jun 14, 2023Updated 3 years ago
- A script to run HLA typing tools from next generation sequencing data☆12Jan 4, 2023Updated 3 years ago
- An R package for Standardized Summary, Annotation, Comparison, and Visualization of CNV, CNVR and ROH☆15Oct 17, 2021Updated 4 years ago
- Mitochondria Analyzer☆29Dec 13, 2022Updated 3 years ago
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Nov 20, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A series of tools and pipelines for genotyping MHC / HLA genes and alleles using SMRT Sequencing☆22Aug 29, 2016Updated 9 years ago
- Rapid and accurate ancestry inference using SNVs.☆28Aug 15, 2025Updated 10 months ago
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Feb 1, 2023Updated 3 years ago
- fast webservices based query tool for large sets of genomic features☆26May 10, 2025Updated last year
- Web application for clinical pharmacogenomic interpretation☆10Mar 3, 2017Updated 9 years ago
- HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.☆79Feb 28, 2023Updated 3 years ago
- ☆11Apr 3, 2023Updated 3 years ago
- ☆13Jul 17, 2024Updated last year
- Human mitochondrial variants annotation using HmtVar.☆18Oct 16, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 7 months ago
- The CGView Comparison Tool (CCT) is a package for visually comparing bacterial, plasmid, chloroplast, and mitochondrial sequences.☆37Apr 13, 2024Updated 2 years ago
- Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes☆71Apr 14, 2026Updated 2 months ago
- Mitochondrial Genome Assembly☆17Feb 21, 2024Updated 2 years ago
- Mitochondrial Solar Plot☆25Feb 25, 2017Updated 9 years ago
- Free mtDNA Haplogroup Classification Service☆34Jun 9, 2026Updated last week
- phenotype-based prioritization of candidate genes for human diseases☆64Jan 25, 2023Updated 3 years ago
- ☆52Jun 25, 2024Updated last year
- A toolkit for performing set operations - union, intersection and complement - on k-mer lists.☆35Nov 22, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high…☆10Updated this week
- Software for hybridization capture bait design☆11Jun 12, 2026Updated last week
- Shiny app for geno-pheno catalog☆11Nov 4, 2022Updated 3 years ago
- Integrated copy number variation detection toolset☆26Feb 12, 2020Updated 6 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆18Dec 28, 2022Updated 3 years ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆73Jun 26, 2023Updated 2 years ago
- Tools for analyzing raw DNA test data files. Shows Y chromosome and mitochondrial mtDNA haplogroups. LGPLv3 - use freely but share improv…☆13Dec 2, 2024Updated last year