Alternatives and similar repositories for evoker

Users that are interested in evoker are comparing it to the libraries listed below

• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• mcveanlab / TreeWAS
  ☆16Updated 7 years ago
• salmonteam / SalmonBlogResponse
  Response to blog post about Salmon
  ☆37Updated 8 years ago
• mikelove / alpine
  Modeling and correcting fragment sequence bias for RNA-seq
  ☆24Updated last year
• AlexTISYoung / hlmm
  Library and command line scripts for fitting heteroskedastic linear mixed models to genetic data. Can be used to perform GWAS for genetic…
  ☆18Updated 7 years ago
• nellore / runs
  Scripts for reproducing analyses of large RNA-seq datasets
  ☆15Updated 6 years ago
• pachterlab / kallisto-sleuth-workshop-2016
  materials and website for the 2016 kallisto sleuth workshop
  ☆11Updated 8 years ago
• freestatman / ideogRam
  R htmlwidget package for ideogram.js
  ☆15Updated 2 years ago
• jamesware / alleleFrequencyApp
  Allele frequency filter app
  ☆14Updated 3 years ago
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• COMBINE-lab / shoal
  Improved multi-sample transcript abundance estimates using adaptive priors
  ☆20Updated 6 years ago
• ruolin / strawberry
  A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)
  ☆24Updated 4 years ago
• mturchin20 / bmass
  R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)
  ☆10Updated 5 years ago
• jmonlong / PopSV
  Population-based detection of structural variation from High-Throughput Sequencing.
  ☆32Updated 3 years ago
• friend1ws / pmsignature
  R package for extracting mutation signatures from a list of somatic mutations
  ☆37Updated 6 years ago
• dcjones / isolator
  Rapid and robust analysis of RNA-Seq experiments.
  ☆32Updated 9 years ago
• mcveanlab / treeseq-inference
  Work for the tree sequence inference paper.
  ☆23Updated 4 years ago
• andrej-fischer / cloneHD
  High-definition reconstruction of clonal composition from next-generation sequencing data
  ☆41Updated 9 years ago
• gkichaev / PAINTOR_V2.1
  ☆22Updated 8 years ago
• kjgilbert / QstFstComp
  R Package for performing Qst-Fst analyses
  ☆21Updated 7 years ago
• mills-lab / dinumt
  ☆13Updated 3 years ago
• mjsull / HapFlow
  Visualise interstrain recombination from environmental samples.
  ☆26Updated 6 years ago
• DudbridgeLab / avengeme
  Statistical properties of polygenic risk scores
  ☆19Updated 5 years ago
• AgResearch / KGD
  Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment
  ☆21Updated 2 months ago
• churchill-lab / emase
  Expectation-Maximization algorithm for Allele-Specific Expression
  ☆21Updated 2 years ago
• gersteinlab / aloft
  ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…
  ☆19Updated 5 years ago
• zhanxw / seqminer
  Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
  ☆31Updated last week
• pachterlab / bears_analyses
  Examples of kallisto + sleuth
  ☆11Updated 8 years ago
• davemcg / SeeGEM
  Interactive table from gemini output
  ☆10Updated 6 years ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆41Updated last year