dpuiu / MitoHPCLinks
☆17Updated last year
Alternatives and similar repositories for MitoHPC
Users that are interested in MitoHPC are comparing it to the libraries listed below
Sorting:
- ☆23Updated last year
- ☆38Updated 2 years ago
- This repo is be archived, these workflows are still housed housed in the GATK repository under the scripts directory. The workflows are a…☆22Updated 5 years ago
- Micro DNA identification☆23Updated 4 years ago
- ☆24Updated last year
- Long-read Isoform Quantification and Analysis☆38Updated 10 months ago
- ☆37Updated 6 years ago
- ☆44Updated last year
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆48Updated 5 years ago
- ☆23Updated 4 years ago
- ☆27Updated 3 years ago
- ☆15Updated last year
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Updated 4 years ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆42Updated last year
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆34Updated last year
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆24Updated 3 years ago
- Tools for processing and analyzing structural variants.☆34Updated 10 years ago
- A software for calculating telomere length☆73Updated 7 years ago
- ☆27Updated 9 months ago
- Variant annotation and merging pipeline☆41Updated 6 months ago
- This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially …☆27Updated 6 months ago
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆72Updated last month
- CN-Learn☆30Updated 6 years ago
- Burden testing against public controls☆50Updated last year
- Detecting NUMTs from WGS☆13Updated 2 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆15Updated last year
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 6 months ago
- ☆20Updated 3 years ago
- NANOME pipeline (Nanopore long-read sequencing consensus DNA methylation detection method and pipeline)☆34Updated last month
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆34Updated 2 years ago