MarcElosua / SPOTlight_deconvolution_analysis
☆16Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for SPOTlight_deconvolution_analysis
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated 10 months ago
- SCDC☆42Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆31Updated 3 years ago
- Accurate and fast cell marker gene identification with COSG☆38Updated last year
- Spatial transcriptomics of heart tissue☆17Updated 2 years ago
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆17Updated 2 years ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆34Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆20Updated 2 weeks ago
- Inferring CNV data from single cell ATAC seq☆22Updated 9 months ago
- Code used in article: Tracing cell-type evolution by cross-species comparison of cell atlases☆18Updated 4 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆46Updated last month
- Estimation of Single-Cell Potency with Single Cell Entropy☆38Updated last year
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆25Updated last month
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆40Updated last year
- Code repository for single cell RNA-seq☆32Updated 4 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆21Updated 6 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆26Updated 2 years ago
- Spatial Transcriptomics Algorithm Reconstructing Copy-number Heterogeneity☆20Updated 4 months ago
- ☆16Updated last year
- ☆10Updated last year
- ☆22Updated last year
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆43Updated 7 months ago
- Functions for single cell data analysis☆27Updated 3 years ago
- ☆16Updated 8 months ago
- code and dataset for spatialDWLS☆12Updated 3 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆26Updated 4 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆25Updated 3 years ago
- ☆58Updated 5 years ago
- ☆34Updated 2 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆50Updated last month