LieberInstitute / HumanPilotLinks
Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
☆84Updated last year
Alternatives and similar repositories for HumanPilot
Users that are interested in HumanPilot are comparing it to the libraries listed below
Sorting:
- Code for the spatialLIBD R/Bioconductor package and shiny app☆96Updated last week
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆94Updated 7 months ago
- ☆122Updated 3 years ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆46Updated last year
- overview of spatial datasets☆76Updated last year
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- ☆59Updated last year
- Python tool for alignment of spatial transcriptomics (ST) data using diffeomorphic metric mapping☆88Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆37Updated last year
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆239Updated last year
- ☆123Updated last year
- Bayesian Analytics for Spatial Segmentation☆29Updated 5 months ago
- End-to-end analysis of spatial multi-omics data☆93Updated last month
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆120Updated 4 months ago
- Code accompanying our manuscript "Coordinated cellular neighborhoods orchestrate antitumoral immunity at the colorectal cancer invasive f…☆67Updated 11 months ago
- Spatial-Linked Alignment Tool☆88Updated 9 months ago
- ☆52Updated 4 years ago
- ☆61Updated 11 months ago
- A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.☆137Updated last week
- Sub-cellular spatial transcriptomics Cell Segmentation☆68Updated 2 years ago
- ☆55Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆61Updated last year
- ☆142Updated 9 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆40Updated 7 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆75Updated 3 years ago
- ☆51Updated 4 months ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆73Updated last year
- Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many othe…☆54Updated this week
- ☆134Updated last year
- domain adaptation of spatial and single-cell transcriptome☆27Updated last year