LieberInstitute / HumanPilot
Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
☆71Updated 6 months ago
Related projects ⓘ
Alternatives and complementary repositories for HumanPilot
- Code for the spatialLIBD R/Bioconductor package and shiny app☆84Updated 3 weeks ago
- Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.☆111Updated last month
- overview of spatial datasets☆69Updated 9 months ago
- ☆108Updated 2 years ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆29Updated 7 months ago
- ☆99Updated 7 months ago
- ☆49Updated 4 months ago
- Spatial-Linked Alignment Tool☆81Updated 5 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆31Updated last year
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆105Updated 3 months ago
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆56Updated last year
- Python tool for alignment of spatial transcriptomics (ST) data using diffeomorphic metric mapping☆69Updated 11 months ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆53Updated 6 months ago
- The benchmarking of spatial transcriptomics deconvolution methods☆23Updated last year
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆78Updated last year
- A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.☆96Updated this week
- Her2 Breast Cancer Project☆57Updated last year
- Additional code and analysis from the single-cell integration benchmarking project