☆12Aug 16, 2022Updated 3 years ago
Alternatives and similar repositories for St-review
Users that are interested in St-review are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- code and dataset for spatialDWLS☆14Apr 18, 2021Updated 5 years ago
- ☆131Jun 10, 2022Updated 3 years ago
- ☆21Jun 29, 2022Updated 3 years ago
- The benchmarking of spatial transcriptomics deconvolution methods☆34Feb 24, 2023Updated 3 years ago
- domain adaptation of spatial and single-cell transcriptome☆28Sep 21, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Spatial Transcriptomics Capture Location Deconvolution☆205Oct 20, 2025Updated 6 months ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Apr 24, 2020Updated 6 years ago
- ☆132Feb 11, 2024Updated 2 years ago
- ☆53Apr 1, 2021Updated 5 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 4 years ago
- Spatial mapping of cell types by integration of transcriptomics data☆100Jun 30, 2022Updated 3 years ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆40Aug 11, 2022Updated 3 years ago
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 3 years ago
- UniCell Deconvolve Paper☆10Apr 25, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- R code used to analyze single cell PDAC data☆43Jun 29, 2024Updated last year
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆48Aug 7, 2021Updated 4 years ago
- Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial …☆449Jan 22, 2026Updated 3 months ago
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Sep 29, 2024Updated last year
- ☆13Feb 15, 2024Updated 2 years ago
- Single-cell data analysis☆14Sep 11, 2025Updated 7 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆67Nov 10, 2023Updated 2 years ago
- Fit Gamma-Poisson Generalized Linear Models Reliably☆121Mar 17, 2025Updated last year
- ☆12Mar 20, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆21Dec 23, 2024Updated last year
- ☆15Aug 9, 2023Updated 2 years ago
- Supporting material for publication: "Ovarian cancer mutational processes drive site-specific immune evasion"☆24May 10, 2025Updated 11 months ago
- single cell analysis of treatment naive and treated human PDAC☆25May 27, 2022Updated 3 years ago
- ☆12Aug 20, 2023Updated 2 years ago
- Identify spatial domain☆90May 29, 2025Updated 11 months ago
- ☆154Mar 19, 2024Updated 2 years ago
- ☆23Mar 29, 2023Updated 3 years ago
- scDoRI (single-cell Deep multi-Omic Regulatory Inference) is a deep learning model to infer enhancer-mediated gene regulatory networks (e…☆31Aug 20, 2025Updated 8 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Interactive applications of stlearn☆15May 1, 2023Updated 2 years ago
- Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)☆11Feb 2, 2026Updated 2 months ago
- SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/☆23Sep 19, 2021Updated 4 years ago
- Analaysis for the batch correction paper☆12Apr 26, 2025Updated last year
- Tutorials on using latest dynamo package☆27Dec 21, 2025Updated 4 months ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆31Aug 8, 2023Updated 2 years ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Sep 20, 2022Updated 3 years ago