JiawenChenn / St-reviewLinks
☆12Updated 3 years ago
Alternatives and similar repositories for St-review
Users that are interested in St-review are comparing it to the libraries listed below
Sorting:
- code and dataset for spatialDWLS☆14Updated 4 years ago
- Spatial direct messaging detected by bivariate Moran☆31Updated 4 months ago
- Spatial transcriptomics of heart tissue☆27Updated 3 years ago
- ☆31Updated 9 months ago
- Code associated with the manuscript Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in t…☆20Updated 3 years ago
- The code for processing single cell RNA-Seq dataset from ESCC cohorts☆12Updated 4 years ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆33Updated 7 months ago
- GASTON: deep learning algorithm learns "topography" of a tissue slice from spatial transcriptomics data☆63Updated 5 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆41Updated 9 months ago
- Bayesian Analytics for Spatial Segmentation☆30Updated 6 months ago
- ☆32Updated last month
- Detect hierarchical structures in cell-cell communications☆16Updated 10 months ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Updated 2 years ago
- ☆20Updated 2 years ago
- Spatially resolved transcriptomic analysis☆61Updated 3 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated last year
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆53Updated 10 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆25Updated 5 months ago
- ☆23Updated 2 years ago
- ☆40Updated 3 years ago
- ☆21Updated 3 years ago
- ☆45Updated last year
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆21Updated 3 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆29Updated last year
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 9 months ago
- ☆30Updated 6 months ago
- RA Synovial Single-cell Multimodal Cell Atlas☆19Updated last year
- ☆50Updated last month
- The benchmarking of spatial transcriptomics deconvolution methods☆33Updated 2 years ago
- Spatial transcriptome analysis in python☆24Updated 10 months ago