Alternatives and similar repositories for St-review

Users that are interested in St-review are comparing it to the libraries listed below

• YingMa0107 / IRIS
  Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics
  ☆35Updated 3 months ago
• rdong08 / spatialDWLS_dataset
  code and dataset for spatialDWLS
  ☆13Updated 4 years ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆21Updated 2 years ago
• zhengli09 / BASS
  Bayesian Analytics for Spatial Segmentation
  ☆27Updated last week
• StatBiomed / SpatialDM
  Spatial direct messaging detected by bivariate Moran
  ☆26Updated 2 weeks ago
• ma-compbio / GAGE-seq
  Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq
  ☆13Updated last year
• leihouyeung / STdeconv_benchmark
  The benchmarking of spatial transcriptomics deconvolution methods
  ☆31Updated 2 years ago
• strangephone / EENT-ONB
  scRNA-seq analysis of EENT-ONB
  ☆20Updated last year
• wangjun-hub / CODEX_SCLC
  This repository includes codes and data example used in the "Integrative Spatial Analysis Reveals Tumor Heterogeneity and Immune Colon…
  ☆12Updated 2 months ago
• QuKunLab / SPACEL
  ☆57Updated 9 months ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆42Updated 5 months ago
• maximemeylan / Meylan_et_al_2022
  ☆19Updated 3 years ago
• LiHongCSBLab / SOAPy
  ☆29Updated 2 months ago
• TencentAILabHealthcare / spatialID
  ☆37Updated 2 years ago
• bsungwoo / spSeudoMap
  spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data
  ☆12Updated 7 months ago
• Chuxj / CRC-atlas
  ☆25Updated 11 months ago
• christophhmayr / 2023_Mayr
  Code for the spatial transcriptomic paper on IPF lungs
  ☆17Updated 10 months ago
• MarcElosua / SPOTlight_deconvolution_analysis
  ☆19Updated 2 years ago
• Moldia / Xenium_benchmarking
  Code used to benchmark Xenium
  ☆57Updated 10 months ago
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆27Updated 10 months ago
• Teichlab / HCA_Heart_ver2
  ☆34Updated last year
• dpeerlab / ENVI
  ☆48Updated last month
• YangLabHKUST / Portal
  Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
  ☆30Updated last year
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆44Updated last month
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆35Updated 10 months ago
• Banovich-Lab / Spatial_PF
  ☆27Updated 2 months ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆30Updated 2 months ago
• Masood-Lab / PDAC_Mets
  The current study provides a comprehensive insights into the PDAC metastatic biology.
  ☆17Updated 9 months ago
• LungCellAtlas / HLCA_reproducibility
  This repository contains all code used for the Human Lung Cell Atlas project.
  ☆49Updated last year
• QihuangZhang / CeLEry
  CeLEry: cell location recovery in single-cell RNA sequencing
  ☆34Updated 3 months ago