Quartet Sampling method for phylogenetic branch support evaluation
☆19Feb 26, 2024Updated 2 years ago
Alternatives and similar repositories for quartetsampling
Users that are interested in quartetsampling are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for computing various support scores for internodes☆19Apr 7, 2020Updated 6 years ago
- R package to calculate the similarity of two trees based on the number of shared four-taxon subtrees (or splits)☆17Mar 22, 2026Updated 2 weeks ago
- Hybridization detection using phylogenetic invariants☆52Oct 29, 2024Updated last year
- ARCHIVED Access sequences from the 1000 Plant Initiative (1KP)☆13Nov 7, 2025Updated 5 months ago
- ☆26Apr 14, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Sep 29, 2014Updated 11 years ago
- R package for simulating fossil data on phylogenetic trees under mechanistic models of preservation and sampling☆11Mar 19, 2026Updated 3 weeks ago
- Alignment-Based Sequence extraction☆15Feb 14, 2022Updated 4 years ago
- ☆18Dec 5, 2020Updated 5 years ago
- Explore spaces of phylogenetic trees☆29Aug 28, 2025Updated 7 months ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Jun 12, 2024Updated last year
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆17May 27, 2024Updated last year
- ☆45Sep 5, 2023Updated 2 years ago
- Helper scripts for processing and visualization of phylogenetics datasets☆31Feb 19, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- The BaitFisher-package is a software package for designing hybrid enrichment probes. For more information see:☆13Oct 20, 2021Updated 4 years ago
- que paquete☆10Jul 17, 2024Updated last year
- Gene family evolution analysis of OneKP capstone paper☆13May 10, 2021Updated 4 years ago
- shell tools for processing phylogenetic trees☆119Aug 30, 2022Updated 3 years ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Dec 7, 2021Updated 4 years ago
- Phylogenetic ANalyses of DiversificAtion☆27Jan 27, 2026Updated 2 months ago
- R and Python scripts used to simulate gene trees under coalescent model and detect gene flow using triple frequency☆15Dec 15, 2022Updated 3 years ago
- Calculate summary statistics and manipulate multiple sequence alignments☆93Jan 28, 2026Updated 2 months ago
- Orthology prediction using a graph-based, reciprocal approach with profile hidden Markov models☆33Jan 7, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- spruceup☆25Aug 15, 2025Updated 7 months ago
- Python version of PHLAWD☆21Oct 28, 2024Updated last year
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆13Nov 25, 2024Updated last year
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 7 years ago
- A python tool for rapidly assessing the monophyly of user-defined groups in phylogenetic trees.☆11Apr 25, 2024Updated last year
- PartitionFinder discovers optimal partitioning schemes for DNA sequences.☆71Mar 10, 2021Updated 5 years ago
- Exploring the Phylogenetic Signal in Continuous Traits☆19Jun 10, 2025Updated 10 months ago
- Quantifying Introgression via Branch Lengths☆57Sep 30, 2022Updated 3 years ago
- Visualizing gene tree conflict using Phyparts, and ETE3☆14Jun 17, 2023Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Bash scripts for analysis of Hyb-Seq data (from raw reads to species trees/networks)☆20Mar 20, 2026Updated 3 weeks ago
- Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)☆11May 3, 2024Updated last year
- Topology weighting by iterative sampling of sub-trees☆87Jan 5, 2025Updated last year
- Sketch phylogenetic trees and networks☆24Feb 5, 2026Updated 2 months ago
- Spread visualizes how viruses and other pathogens are spreading in time and space. It creates compellable shareable, interactive and time…☆20Jan 23, 2025Updated last year
- An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.☆16Aug 20, 2025Updated 7 months ago
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 4 years ago