FePhyFoFum / quartetsampling
Quartet Sampling method for phylogenetic branch support evaluation
☆16Updated 8 months ago
Related projects ⓘ
Alternatives and complementary repositories for quartetsampling
- ☆38Updated last year
- ☆16Updated 3 years ago
- Code for computing various support scores for internodes☆18Updated 4 years ago
- This repository contains the code and manual for the R package delimitR.☆16Updated 2 years ago
- Workflow to detect and phase hybrids in target capture data☆18Updated last year
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆10Updated 10 years ago
- DFOIL: Introgression Testing for Five Taxa☆29Updated 3 years ago
- ☆25Updated last year
- Helper scripts for processing and visualization of phylogenetics datasets☆25Updated 9 months ago
- Alignment-Based Sequence extraction☆14Updated 2 years ago
- R package for analysis of hybrids and hybrid zones☆18Updated 10 months ago
- Scripts for population genetics analysis☆19Updated 2 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 4 years ago
- Population assignment analysis using R☆17Updated 2 weeks ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆32Updated last year
- ☆12Updated 6 months ago
- ☆21Updated 10 years ago
- Quantifying Introgression via Branch Lengths☆49Updated 2 years ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- Phylogenetic penalized likelihood☆46Updated 4 months ago
- Hybridization detection using phylogenetic invariants☆42Updated 3 weeks ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆19Updated 3 years ago
- An R Package to build and simulate coalescent models☆19Updated 7 months ago
- Prepare XML input files for divergence-time estimation with SNAPP☆19Updated last year
- GONE: Scripts, programs and an example data set☆43Updated 10 months ago
- Visualizing gene tree conflict using Phyparts, and ETE3☆13Updated last year
- ☆17Updated 6 years ago
- The stairway plot is a method for inferring detailed population demographic history using the site frequency spectrum (SFS) from DNA sequ…☆31Updated last year
- An R function to compute Concordance Factors from SNP datasets☆13Updated last year
- ☆11Updated 7 years ago