phac-nml / gview-wiki
The gview wiki migrated to GitHub.
☆10Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for gview-wiki
- Prokaryotic Pangenome Analysis☆24Updated 2 years ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆22Updated 6 months ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆27Updated last year
- finding conserved regions in highly diverse genomes☆15Updated 3 months ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files☆19Updated last year
- a python package for automated generation of phylogenetic trees from genbank files☆16Updated this week
- ☆22Updated 11 months ago
- MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…☆19Updated 3 years ago
- A workflow and scripts for large-scale antiSMASH analyses☆30Updated last week
- A pipeline for whole genome assembly☆16Updated 2 years ago
- A python library for predicting phage lifestyle based on genome sequence☆35Updated last year
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆29Updated 2 years ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆29Updated last year
- alignment-free coverage calculation for metagenomic binning >100 times faster☆37Updated 2 months ago
- ☆18Updated 2 years ago
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes to select representatives for comparative genomics and met…☆40Updated 2 weeks ago
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆25Updated this week
- Microbial agile accurate SNP Typer☆29Updated 10 months ago
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- ProkEvo - an automated, reproducible, and scalable framework for high-throughput bacterial population genomics analyses.☆17Updated 3 years ago
- Code for detecting genomic island insertions in clades of microbes.☆19Updated last year
- Prophage Tracer: precisely tracing prophages in prokaryotic genomes using overlapping split-read alignment☆22Updated 3 weeks ago
- Influenza genome analysis Nextflow workflow☆22Updated last week
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆25Updated 2 weeks ago
- Python tool to reduce size and redundancy of phylogenetic datasets☆27Updated last year
- ☆19Updated 3 years ago
- A Perl script allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆12Updated 6 months ago
- Find Unique genomic Regions☆29Updated this week
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆24Updated this week
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆21Updated 7 months ago