Trimming tool for Oxford Nanopore sequence data
☆22Jun 22, 2021Updated 4 years ago
Alternatives and similar repositories for ProwlerTrimmer
Users that are interested in ProwlerTrimmer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Jul 3, 2022Updated 3 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Jul 13, 2023Updated 2 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆30Jun 13, 2023Updated 2 years ago
- The gview wiki migrated to GitHub.☆11Sep 3, 2020Updated 5 years ago
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆35Dec 4, 2025Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- EzAAI - High Throughput Prokaryotic AAI Calculator☆47Feb 5, 2026Updated last month
- a versatile toolkit for processing and analyzing diverse types of sequence data☆22Feb 18, 2026Updated last month
- BRICK creates a BRIG-like interactive data visualisation for bacterial genome annotations and comparisons☆21Dec 9, 2025Updated 3 months ago
- Sequence correction provided by ONT Research☆502Dec 8, 2025Updated 3 months ago
- Calculate fastq reads and sequencing coverage☆15Oct 20, 2020Updated 5 years ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆58Nov 21, 2024Updated last year
- Recentrifuge: robust comparative analysis and contamination removal for metagenomics☆101Feb 10, 2026Updated last month
- ☆15Apr 2, 2024Updated last year
- Generic methods, types and modules for the BioJulia ecosystem.☆12Jul 11, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Minimal but speedy quality control for nanopore reads in Rust☆137Sep 16, 2024Updated last year
- Filtering and trimming of long read sequencing data☆215Jan 16, 2023Updated 3 years ago
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Feb 3, 2023Updated 3 years ago
- ☆13Apr 5, 2024Updated last year
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆19Nov 29, 2023Updated 2 years ago
- Long read aligner☆114May 26, 2023Updated 2 years ago
- This repository was built using the same code from tunapanda. I've made modifications to help others download this code and add it to the…☆10Mar 1, 2021Updated 5 years ago
- ♥ Efficient Estimation of Evolutionary Distances☆47Feb 15, 2026Updated last month
- Long-read metagenomic analysis☆110Oct 10, 2023Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Simulate mutations in genomes☆15Jun 15, 2020Updated 5 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Dec 21, 2022Updated 3 years ago
- NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly☆51Dec 16, 2019Updated 6 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Jun 1, 2022Updated 3 years ago
- Lemur is a tool for rapid and accurate taxonomic profiling on long-read metagenomic datasets☆25Feb 26, 2026Updated last month
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆171Mar 19, 2026Updated last week
- JEME method for predicting enhancer targets☆11Jul 15, 2017Updated 8 years ago
- multiPhATE with comparative genomics☆18Jun 14, 2021Updated 4 years ago
- ☆15Jun 21, 2022Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Personal website, now in Nuxt☆11Jan 28, 2026Updated last month
- A MinION-based pipeline for tracking species biodiversity☆13Feb 19, 2024Updated 2 years ago
- ☆16Apr 11, 2023Updated 2 years ago
- Third-generation fusion gene detection☆13Jul 25, 2023Updated 2 years ago
- adapter trimmer for Oxford Nanopore reads☆385May 8, 2024Updated last year
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Oct 4, 2021Updated 4 years ago
- Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.☆105Jan 28, 2026Updated last month