ARG normalization by mapping to the ARO ontology.
☆65Apr 25, 2026Updated last week
Alternatives and similar repositories for argNorm
Users that are interested in argNorm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- annotating microbial co-occurrence networks☆12Oct 7, 2025Updated 6 months ago
- Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure☆176Apr 22, 2026Updated last week
- ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.☆301Feb 3, 2026Updated 3 months ago
- Precise host read removal☆122Apr 13, 2026Updated 3 weeks ago
- A mini course on biological data analysis☆10Jan 16, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Dadaist2 🟨 Highway to R☆13Mar 7, 2025Updated last year
- The gview wiki migrated to GitHub.☆11Sep 3, 2020Updated 5 years ago
- A Hierarchical Approach to Pangenomics Inference☆13Apr 15, 2024Updated 2 years ago
- A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes. It provides two models,deepARG-SS and deep…☆56Nov 15, 2023Updated 2 years ago
- Lemur is a tool for rapid and accurate taxonomic profiling on long-read metagenomic datasets☆25Updated this week
- ⚡️🧬 FastMLST: A multi-core tool for multilocus sequence typing of draft genome assemblies☆25Apr 10, 2026Updated 3 weeks ago
- ☆83Apr 10, 2026Updated 3 weeks ago
- BEAV: Bacterial Element Annotation reVamped☆77Aug 21, 2025Updated 8 months ago
- Map query sequences to the assemblies of all pre-June 2023 bacteria (https://ftp.ebi.ac.uk/pub/databases/AllTheBacteria/Releases/0.2/) on…☆12May 22, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆41Feb 9, 2022Updated 4 years ago
- I am sharing my code repository to understand the working and principle of working of various BioInformatics code in Python☆30Oct 2, 2025Updated 7 months ago
- This repository offers a streamlined RNA-Seq analysis workflow implemented in R, designed to transform raw sequencing data into meaningfu…☆31Dec 15, 2024Updated last year
- alignment-free coverage calculation for metagenomic binning >100 times faster☆50Mar 13, 2025Updated last year
- A command-line tool for profiling CAZyme abundances in metagenomic datasets.☆28Updated this week
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆249Oct 12, 2025Updated 6 months ago
- ProkEvo - an automated, reproducible, and scalable framework for high-throughput bacterial population genomics analyses.☆18Aug 16, 2021Updated 4 years ago
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆56Updated this week
- A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.☆49Feb 5, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Graph-based assembly phasing☆94Nov 25, 2025Updated 5 months ago
- Metagenomic Estimation of Dietary Intake and Content.☆41Jan 29, 2026Updated 3 months ago
- MAGScoT - a MAG scoring and refinement tool☆44Apr 8, 2026Updated 3 weeks ago
- A fork of Prodigal meant to improve gene calling for giant viruses and viruses that use alternative genetic codes☆50Oct 12, 2023Updated 2 years ago
- The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …☆21Oct 2, 2025Updated 7 months ago
- ☆97Updated this week
- Set of utilities on sequences and BAM files☆27Oct 27, 2021Updated 4 years ago
- Code used to analyse and plot metadata of metagenomic binning tools☆14Aug 22, 2024Updated last year
- geNomad: Identification of mobile genetic elements☆304Mar 29, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A bacterial GWAS pipeline written in Nextflow that uses Pyseer; Part III Project for Systems Biology at the University of Cambridge☆22Jan 20, 2026Updated 3 months ago
- Bacterial Genomics workflow for short(Illumina) and long-read (Oxford Nanopore) sequencing data☆12Feb 20, 2026Updated 2 months ago
- Novelty-inclusive microbial (and now dsDNA phage) community profiling of shotgun metagenomes☆185Apr 16, 2026Updated 2 weeks ago
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆75Mar 3, 2026Updated 2 months ago
- ViralCC: leveraging metagenomic proximity-ligation to retrieve complete viral genomes☆18Feb 3, 2026Updated 3 months ago
- (Meta-)genome screening for functional and natural product gene sequences☆107Updated this week
- Read alignment statistics for metagenomics☆396Apr 8, 2026Updated 3 weeks ago