multiGenomicContext is a pipeline to see your protein in many genomic context as much as gbk you have.
☆11Oct 10, 2022Updated 3 years ago
Alternatives and similar repositories for multiGenomicContext
Users that are interested in multiGenomicContext are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The gview wiki migrated to GitHub.☆11Sep 3, 2020Updated 5 years ago
- Space molecules in your terminal!☆13Feb 7, 2022Updated 4 years ago
- ☆11Sep 16, 2021Updated 4 years ago
- Fantaxtic - Nested Bar Plots for Phyloseq Data☆33Jul 14, 2024Updated last year
- R package to draw syntenic plots in 3 different styles☆45Feb 2, 2026Updated last month
- ☆23Jan 7, 2026Updated 2 months ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Mar 8, 2024Updated 2 years ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆21Jun 2, 2021Updated 4 years ago
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆22Nov 21, 2025Updated 4 months ago
- Scaling and Load Balancing Shiny for R and Python Apps with Docker☆13Jun 1, 2024Updated last year
- Client for the Bioconductor AnnotationHub web resource☆19Oct 30, 2025Updated 4 months ago
- ☆81Mar 13, 2026Updated last week
- Conditional Reciprocal Best Blast☆43Mar 22, 2017Updated 9 years ago
- The CGView Comparison Tool (CCT) is a package for visually comparing bacterial, plasmid, chloroplast, and mitochondrial sequences.☆38Apr 13, 2024Updated last year
- Gene-flank analysis tool☆37Dec 18, 2024Updated last year
- A set of R functions that help faciliate a lot of tedious processing☆18Aug 31, 2018Updated 7 years ago
- Talk to the NCBI EUtils☆23Oct 8, 2020Updated 5 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Mar 22, 2021Updated 5 years ago
- A provenance library for bioinformatics workflows 🧬 🔀 📝☆14Oct 5, 2021Updated 4 years ago
- Development repo for pyani-plus (the next iteration of pyani)☆27Updated this week
- Pipelines and tools for the processing of ancient and modern HTS data.☆48Mar 6, 2026Updated 2 weeks ago
- An R package designed for drawing gene arrow maps☆97Sep 29, 2025Updated 5 months ago
- Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights☆17Nov 24, 2025Updated 3 months ago
- A chronological age predictor based on DNA methylation☆22Mar 14, 2024Updated 2 years ago
- Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…☆15May 24, 2023Updated 2 years ago
- ☆13Mar 28, 2018Updated 7 years ago
- Federating genomes with love (and synteny derived from functional annotations)☆45Updated this week
- You will find all the scripts organized by chapter of my book "Mapping Worlds with R: Your Journey from Beginner to Data Cartographer" in…☆49Apr 27, 2025Updated 10 months ago
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Mar 29, 2025Updated 11 months ago
- Temporal Pathway Synthesizer☆17Jun 28, 2024Updated last year
- ☆10May 17, 2022Updated 3 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Jun 6, 2024Updated last year
- Processing and analysis of data coming from Illumina sequencing machines☆10Mar 14, 2026Updated last week
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆12Sep 15, 2023Updated 2 years ago
- Writing a custom connection for R☆16May 15, 2025Updated 10 months ago
- A tool to filter BUSCO output into single-copy gene files for phylogenomics☆13Jul 24, 2024Updated last year
- 🖨️ Print pictures with living micro-organisms!☆14Apr 9, 2025Updated 11 months ago
- Calculate voronoi-style polygons based on route distances / durations☆12Apr 16, 2025Updated 11 months ago
- This tutorial is a guide to perform TWAS with the data used in Torres‐Rodríguez, J. Vladimir, et al. "Population‐level gene expression ca…☆23Feb 23, 2026Updated last month