Alternatives and similar repositories for awesome-protein-design-software

Users that are interested in awesome-protein-design-software are comparing it to the libraries listed below

• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆54Updated 2 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆48Updated 2 weeks ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆30Updated 7 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆40Updated last month
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆69Updated 4 months ago
• bwicky / oligomer_hallucination
  ☆35Updated last year
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆26Updated 3 weeks ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆54Updated 7 months ago
• coreyhowe999 / RSO
  ☆21Updated 7 months ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆75Updated 3 months ago
• Kuhlman-Lab / evopro
  ☆81Updated 2 months ago
• proteinphysiologylab / frustratometeR
  ☆36Updated 7 months ago
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆55Updated 10 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆67Updated 2 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated last year
• AbSciBio / igdesign
  ☆40Updated 4 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆29Updated 2 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆27Updated last year
• Protein-Engineering-Framework / PyPEF
  PyPEF – Pythonic Protein Engineering Framework
  ☆24Updated last week
• TviNet / NetSolP-1.0
  Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models
  ☆35Updated 5 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆40Updated 2 weeks ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆32Updated 6 years ago
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆56Updated 3 months ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆60Updated 3 weeks ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆48Updated 2 years ago
• HannesStark / CodonMPNN
  ☆27Updated 5 months ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year