Alternatives and similar repositories for RSO

Users that are interested in RSO are comparing it to the libraries listed below

• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆33Updated 8 months ago
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆71Updated last month
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆70Updated last month
• bene837 / af2seq
  ☆43Updated 10 months ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆57Updated 3 months ago
• Kuhlman-Lab / evopro
  ☆81Updated last month
• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 3 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆32Updated 7 months ago
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆35Updated 3 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆63Updated 5 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆51Updated last month
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆27Updated 2 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆67Updated 10 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆55Updated 8 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• dina-lab3D / CombFold
  ☆84Updated 9 months ago
• rigdenlab / ABCFold
  Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.
  ☆79Updated last week
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• mabr3112 / ProtFlow
  A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…
  ☆20Updated last week
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆45Updated 2 months ago
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆58Updated 4 months ago
• LPDI-EPFL / topobuilder
  Parametric Building of de novo Functional Topologies
  ☆44Updated 3 years ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆35Updated 2 years ago
• sokrypton / af2bind
  ☆50Updated 3 weeks ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆57Updated last month
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆38Updated 3 months ago
• suzuki-2001 / adaptyv-protein-comp
  Design data and process for the AdaptyvBio protein design competition
  ☆10Updated 7 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆61Updated 7 months ago
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆56Updated 3 weeks ago