TurtleTools / portein
2D portraits of 3D protein structures
☆20Updated last year
Alternatives and similar repositories for portein:
Users that are interested in portein are comparing it to the libraries listed below
- Python package to atom map, correct and suggest enzymatic reactions☆35Updated 11 months ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆32Updated 10 months ago
- ☆17Updated 2 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- Python package to manage protein structures and their annotations☆42Updated last year
- ☆15Updated 2 years ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆27Updated 2 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Ultra-fast in-silico structure mutation☆32Updated 2 years ago
- ☆24Updated 3 years ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆37Updated last year
- ML toolset for creating TED: The Encyclopedia of Domains☆15Updated 6 months ago
- Machine learning prediction of enzyme optimum pH☆29Updated last month
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆21Updated last week
- PyDock Tutorial☆30Updated 6 years ago
- Efficient manipulation of protein structures in Python☆51Updated 4 months ago
- ☆26Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆41Updated 3 months ago
- Tools for annotation, processing and ML for antibody sequences☆27Updated this week
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆32Updated 3 years ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆42Updated 2 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆26Updated 11 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆36Updated 3 months ago
- A Rust implementation of the LightDock macromolecular docking software☆27Updated 10 months ago
- ☆34Updated 4 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆40Updated 2 years ago
- CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes☆31Updated last month
- ☆14Updated 2 weeks ago
- ☆43Updated 3 months ago