Alternatives and similar repositories for portein

Users that are interested in portein are comparing it to the libraries listed below

• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆33Updated last month
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆27Updated last year
• PDBeurope / protein-cluster-conformers
  Clusters protein chains based on CA distance difference
  ☆14Updated 4 months ago
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆38Updated last year
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆24Updated 3 months ago
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆45Updated 4 months ago
• vttresearch / ActSeek
  Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.
  ☆22Updated last month
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆41Updated last month
• rcsb / strucmotif-search
  Real-time structure motif searching in protein 3D structures using an inverted index strategy
  ☆13Updated 3 weeks ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆25Updated 10 months ago
• NRGlab / Surfaces
  ☆14Updated 3 months ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 5 months ago
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆25Updated 2 weeks ago
• GodzikLab / FATCAT-dist
  ☆15Updated 2 years ago
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆21Updated last week
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆27Updated last year
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆30Updated 7 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆67Updated 2 months ago
• samgoldman97 / enz-pred
  ☆17Updated 2 years ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆54Updated 7 months ago
• refresh-bio / protestar
  Protein Structure Archiver
  ☆12Updated 11 months ago
• Furman-Lab / PatchMAN
  ☆26Updated 3 weeks ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆34Updated 2 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆37Updated 2 months ago
• BioComputingUP / ring-pymol
  This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua
  ☆27Updated 4 months ago
• lcbc-epfl / metal-site-prediction
  ☆39Updated last year
• JudeWells / chainsaw
  ☆39Updated 8 months ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year