our in-house version of ProteinMPNN
☆40Feb 12, 2026Updated 7 months ago
Alternatives and similar repositories for proteinmpnn
Users that are interested in proteinmpnn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Apr 7, 2025Updated last year
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 10 months ago
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆45Mar 22, 2026Updated 6 months ago
- protein folding app running on modal☆39May 30, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆273Sep 9, 2026Updated 2 weeks ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆56Jun 22, 2026Updated 3 months ago
- ☆60Aug 19, 2026Updated last month
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆36Jun 22, 2026Updated 3 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆25Mar 6, 2025Updated last year
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆25Sep 18, 2025Updated last year
- ☆93Sep 25, 2024Updated last year
- OVO, an open-source ecosystem for de novo protein design☆142Updated this week
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 6 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Resources for the BioML Challenge 2024: Bits to Binders☆20Aug 24, 2024Updated 2 years ago
- Potts model-based protein sequence design☆115Jul 1, 2026Updated 2 months ago
- Protein Structure Archiver☆16Sep 10, 2025Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆66May 21, 2025Updated last year
- ☆97Nov 25, 2025Updated 9 months ago
- A Nextflow pipeline for protein binder design☆22Updated this week
- Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction☆17Feb 6, 2026Updated 7 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆163Jul 10, 2026Updated 2 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆64Feb 3, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code for humanization of antibody and nanobody☆96Aug 28, 2025Updated last year
- Fast indexing and search of discontinuous motifs in protein structures☆216Updated this week
- reactive MD python pipeline for GROMACS using Kinetic Monte Carlo / Molecular Dynamics (KIMMDY)☆14Nov 19, 2019Updated 6 years ago
- Repo of AntiBMPNN project for antibody sequence design.☆56May 28, 2025Updated last year
- Ancestral sequence reconstruction with gap-state inference using IQ-TREE☆15Jul 26, 2026Updated last month
- JAX/Equinox translation of ESMFold2☆20Sep 17, 2026Updated last week
- ☆74Feb 13, 2026Updated 7 months ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year
- ☆27Jan 9, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆292Apr 24, 2026Updated 5 months ago
- Source code and examples for AlphaFold Unmasked☆79Jun 23, 2026Updated 3 months ago
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆91Jun 1, 2026Updated 3 months ago
- Official Implementation of IgGM☆231May 28, 2026Updated 3 months ago
- Machine learning prediction of enzyme optimum pH☆57Apr 29, 2025Updated last year
- ☆56Apr 22, 2026Updated 5 months ago
- Public RFDiffusionAA repo☆489Jul 9, 2024Updated 2 years ago