Kuhlman-Lab / proteinmpnnLinks
our in-house version of ProteinMPNN
☆23Updated 3 weeks ago
Alternatives and similar repositories for proteinmpnn
Users that are interested in proteinmpnn are comparing it to the libraries listed below
Sorting:
- ☆71Updated 3 months ago
- ☆44Updated 11 months ago
- Modelling protein conformational landscape with Alphafold☆51Updated last week
- ☆61Updated last year
- ☆87Updated last month
- ☆53Updated last month
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆72Updated last week
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆23Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆44Updated 9 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆75Updated 6 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated 3 months ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆57Updated 3 weeks ago
- Efficient manipulation of protein structures in Python☆56Updated this week
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆70Updated 3 weeks ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆117Updated 2 months ago
- ☆49Updated last month
- code for SeqDance/ESMDance, biophysics-informed protein language models☆40Updated 5 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆99Updated this week
- Official repository of GENzyme☆54Updated 9 months ago
- A benchmark for 3D biomolecular structure prediction models☆64Updated 3 months ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆87Updated 2 weeks ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆83Updated 2 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆65Updated last month
- Codes and scripts for "An artificial intelligence accelerated virtual screening platform for drug discovery"☆56Updated 8 months ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆18Updated 7 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆62Updated 2 months ago
- Structure prediction and design of proteins with noncanonical amino acids☆88Updated last month
- ☆42Updated last year
- Quick mapping of Uniprot sequences to PDB structures☆33Updated 5 months ago