jafetgado / ThermoProtLinks
Predict protein thermostability with ML
☆19Updated last year
Alternatives and similar repositories for ThermoProt
Users that are interested in ThermoProt are comparing it to the libraries listed below
Sorting:
- predict stability change upon mutation☆28Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- Tool for modelling the CDRs of antibodies☆50Updated 2 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated last year
- Predicting the effect of mutations on protein stability using a simple orientational potential.☆16Updated last year
- Iterative masking algorithm on MSA Transformer to generate synthetic sequences☆27Updated last year
- ML toolset for creating TED: The Encyclopedia of Domains☆24Updated 5 months ago
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆46Updated 3 months ago
- ☆28Updated 11 months ago
- ☆71Updated 7 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- ☆42Updated 2 months ago
- ☆22Updated 2 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆39Updated 4 years ago
- Code for peptide ligand design with machine learning models.☆28Updated 10 months ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆25Updated last year
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 3 years ago
- ☆14Updated 3 years ago
- Code for the paper "Learning to engineer protein flexibility".☆22Updated last month
- Machine learning prediction of enzyme optimum pH☆47Updated 6 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated 2 weeks ago
- The DSSP building software☆47Updated 2 years ago
- ☆20Updated 3 years ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- ☆35Updated 3 years ago
- ☆29Updated 5 years ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆85Updated 2 months ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Updated 2 years ago