Predict protein thermostability with ML
☆20Aug 20, 2024Updated last year
Alternatives and similar repositories for ThermoProt
Users that are interested in ThermoProt are comparing it to the libraries listed below
Sorting:
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆73Apr 9, 2024Updated last year
- ☆19Feb 5, 2026Updated 3 weeks ago
- Sequence-based protein solubility prediction using multidimensional embedding☆12Apr 19, 2021Updated 4 years ago
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆119Dec 20, 2023Updated 2 years ago
- Predicting Protein – Ligand Interaction by using Deep Learning Models☆11Nov 13, 2018Updated 7 years ago
- A small web ui and python api service to predict protein melting point temperatures.☆18Jan 21, 2025Updated last year
- This is a repository for CAMPER.☆17Mar 18, 2024Updated last year
- GATSol, an enhanced predictor of protein solubility through the synergy of 3D structure information and large language modeling☆18Sep 7, 2024Updated last year
- ☆17Dec 10, 2022Updated 3 years ago
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- ☆16Aug 1, 2022Updated 3 years ago
- ☆17Jun 24, 2021Updated 4 years ago
- For the purpose of post progressing of MD carried by gromacs☆23Jul 2, 2025Updated 8 months ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Apr 22, 2023Updated 2 years ago
- BRENDA parser in python☆22May 16, 2022Updated 3 years ago
- ☆24May 19, 2025Updated 9 months ago
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Sep 16, 2024Updated last year
- A simple Python library to generate model peptides☆96Nov 29, 2020Updated 5 years ago
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆56Nov 26, 2024Updated last year
- 2D portraits of 3D protein structures☆27Sep 30, 2025Updated 5 months ago
- A collection of software for protein structure prediction and design☆40Dec 16, 2024Updated last year
- ☆32Sep 23, 2023Updated 2 years ago
- predict stability change upon mutation☆30Jun 28, 2024Updated last year
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆26Mar 21, 2024Updated last year
- pyRMSD is a small Python package that aims to offer an integrative and efficient way of performing RMSD calculations of large sets of str…☆27Aug 20, 2020Updated 5 years ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆27Mar 25, 2023Updated 2 years ago
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆40Aug 1, 2025Updated 7 months ago
- My computational biology course as it evolves in real time☆14Aug 31, 2021Updated 4 years ago
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆305Apr 6, 2025Updated 10 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Mar 25, 2025Updated 11 months ago
- Feature map and function annotation of Proteins☆34Jun 13, 2024Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆71Jan 31, 2024Updated 2 years ago
- ☆77Aug 26, 2025Updated 6 months ago
- ☆76Oct 27, 2021Updated 4 years ago
- ☆34Dec 15, 2023Updated 2 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Jul 25, 2024Updated last year
- A Python package for mapping sequence aligned data onto protein structures☆37May 26, 2021Updated 4 years ago
- ☆93Dec 30, 2025Updated 2 months ago
- Computing calibrated prediction intervals for neural network regressors☆10May 28, 2019Updated 6 years ago