Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
☆106Jan 21, 2023Updated 3 years ago
Alternatives and similar repositories for angus
Users that are interested in angus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- notes on the farm cluster☆16Feb 26, 2025Updated last year
- repo for cicese metatranscriptomics workshop, nov 2018☆14Jan 22, 2020Updated 6 years ago
- Readability enhancement tool for bioinformatics data file format☆29Jan 9, 2020Updated 6 years ago
- Muller diagrams excel at visualizing evolutionary dynamics of a population over time. A common use case, and the intended use case durin…☆13Oct 13, 2020Updated 5 years ago
- (a) (p)erfect (c)ircle? ... tests DNA sequences for overlapping ends, then trims and rejoins, and aligns reads to test the join☆11Apr 29, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆20Oct 13, 2014Updated 11 years ago
- A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor☆44May 4, 2016Updated 9 years ago
- Parse samtools pileup file to get how many bases and what kind of bases are called☆14Apr 30, 2024Updated 2 years ago
- Finds SNP sites from a multi-FASTA alignment file☆278Dec 16, 2020Updated 5 years ago
- Interactive, web tool for exploring pan-genome of bacterial strains☆50Jan 14, 2026Updated 3 months ago
- Protein Alignment and Detection Interface☆60Apr 1, 2024Updated 2 years ago
- reference free variant assembly☆34Jul 14, 2023Updated 2 years ago
- Text Only Genome Viewer!☆246Apr 14, 2026Updated 2 weeks ago
- ☆14Jan 8, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆14Oct 14, 2020Updated 5 years ago
- R htmlwidget package for ideogram.js☆15Oct 26, 2022Updated 3 years ago
- Public Health England SNP calling pipeline.☆37Sep 4, 2018Updated 7 years ago
- RNA mapping pipeline☆18Jun 3, 2018Updated 7 years ago
- ☆37Feb 19, 2022Updated 4 years ago
- De novo genome assembler.☆11Jul 30, 2018Updated 7 years ago
- Syntax highlighting for computational biology☆16Dec 19, 2017Updated 8 years ago
- Extract lineage CSVs from NCBI for use with sourmash lca.☆29Oct 4, 2023Updated 2 years ago
- tools for error correction and working with long read data☆44Dec 1, 2014Updated 11 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- hybrid assembly pipeline for bacterial genomes☆639Jul 25, 2024Updated last year
- Repository with materials for the Speeding Up Science Workshops at UC Davis☆10Oct 31, 2019Updated 6 years ago
- ☆18Mar 5, 2017Updated 9 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 8 months ago
- Docker image of JBrowse Genome Browser☆15Apr 12, 2021Updated 5 years ago
- my PhD thesis☆36Jul 10, 2019Updated 6 years ago
- Workflows for correcting and scaffolding long-read (PacBio, nanopore) genome assemblies using optical mapping and/or Dovetail Hi-C data☆20Aug 18, 2020Updated 5 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Jan 19, 2021Updated 5 years ago
- Quickly search, compare, and analyze genomic and metagenomic data sets.☆542Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Masks recombination as detected by ClonalFrameML or Gubbins and draws an SVG☆21Feb 15, 2019Updated 7 years ago
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆15Dec 18, 2021Updated 4 years ago
- An R Markdown template using the bookdown package for preparing a PhD thesis at the University of California Davis☆16Dec 6, 2023Updated 2 years ago
- Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 2…☆10Jan 12, 2019Updated 7 years ago
- An extension of Velvet assembler to de novo metagenome assembly from short sequence reads☆15May 29, 2012Updated 13 years ago
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆115Feb 19, 2019Updated 7 years ago
- Automated optimisation of de-novo transcriptome assembly☆25Nov 11, 2015Updated 10 years ago