notes on the farm cluster
☆16Feb 26, 2025Updated last year
Alternatives and similar repositories for farm-notes
Users that are interested in farm-notes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Oct 14, 2020Updated 5 years ago
- Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis☆12Mar 10, 2021Updated 5 years ago
- Tools for analyzing trees☆13Apr 16, 2025Updated last year
- Repo for WEBSITE of R for Data Analysis & Visualization in Science, a quarter long course oriented for graduate students in Ecology at UC…☆29Sep 25, 2023Updated 2 years ago
- An R Markdown template using the bookdown package for preparing a PhD thesis at the University of California Davis☆16Dec 6, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- repo for cicese metatranscriptomics workshop, nov 2018☆14Jan 22, 2020Updated 6 years ago
- ☆16Jan 21, 2024Updated 2 years ago
- Working with the outputs of sourmash in R☆28Jan 15, 2026Updated 3 months ago
- Tools and utilities for making use of mastiff☆12Mar 10, 2023Updated 3 years ago
- A DRAFT, early stage book on snakemake.☆22Nov 1, 2023Updated 2 years ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Apr 1, 2024Updated 2 years ago
- Materials for Analyzing Next-Generation Sequencing (ANGUS) course.☆106Jan 21, 2023Updated 3 years ago
- Website for BIS 015L, Data Science for Biologists, UC Davis.☆188Mar 12, 2026Updated last month
- Extract lineage CSVs from NCBI for use with sourmash lca.☆29Oct 4, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Genomics Workshop Overview☆48Apr 21, 2026Updated last week
- my bin directory☆45Apr 7, 2026Updated 3 weeks ago
- Lectures and materials for PLS 205: Experimental Design and Analysis at UC Davis☆22Apr 7, 2023Updated 3 years ago
- Lecture notes/book in progress on computing for conservation genomics☆39Jan 29, 2024Updated 2 years ago
- Repository with materials for the Speeding Up Science Workshops at UC Davis☆10Oct 31, 2019Updated 6 years ago
- Code to generate re-assemblies of the Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)☆23Apr 14, 2019Updated 7 years ago
- Material público para la coordinación de la traducción de las lecciones.☆11Oct 22, 2021Updated 4 years ago
- Instructions for contributing the to free and open source materials for teaching foundational computational and data science skills to re…☆12Mar 28, 2022Updated 4 years ago
- A page to test short term memory.☆14Sep 29, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆20Sep 6, 2018Updated 7 years ago
- (formerly eelpond) an automated RNA-Seq workflow system☆27Oct 14, 2020Updated 5 years ago
- kProcessor: kmers processing framework.☆10Oct 1, 2023Updated 2 years ago
- An adaption of the Koshkina et al. 2017 IDSM☆10Aug 19, 2025Updated 8 months ago
- Remove contaminated contigs from genomes using k-mers and taxonomies.☆60Nov 3, 2023Updated 2 years ago
- Snakemake with pytest example☆11Jul 18, 2020Updated 5 years ago
- National Hydrography Network Dataset Tools for R☆10May 11, 2019Updated 6 years ago
- map Illumina metagenomes to genomes!☆38Jan 22, 2026Updated 3 months ago
- Indexing & querying large assembly graphs -- in space, no one can hear you miao!☆118Jan 29, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Jupyter notebooks and Python scripts associated with experiments and analyses presented in "Dynamic visualization of high-dimensional dat…☆27Mar 11, 2023Updated 3 years ago
- Build sourmash databases for genbank.☆11May 4, 2023Updated 2 years ago
- Just another minhash implementation.☆12Mar 12, 2026Updated last month
- Materials for the Training and Engagement Website☆25Jan 12, 2024Updated 2 years ago
- Scripts and files for the annual Short Read Analysis Workshop☆12Apr 2, 2026Updated 3 weeks ago
- Functional Flow Calculator☆14Oct 11, 2024Updated last year
- Documentation for the .NET Bio project☆11Sep 20, 2017Updated 8 years ago