repo for cicese metatranscriptomics workshop, nov 2018
☆14Jan 22, 2020Updated 6 years ago
Alternatives and similar repositories for 2018-cicese-metatranscriptomics
Users that are interested in 2018-cicese-metatranscriptomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Oct 9, 2017Updated 8 years ago
- Repository with materials for the Speeding Up Science Workshops at UC Davis☆10Oct 31, 2019Updated 6 years ago
- Tools for analyzing trees☆13Apr 16, 2025Updated 11 months ago
- ☆14Oct 14, 2020Updated 5 years ago
- ☆20Dec 4, 2025Updated 3 months ago
- ☆16Jan 21, 2024Updated 2 years ago
- Profiler for metagenomics based on NGLess☆13Feb 22, 2024Updated 2 years ago
- notes on the farm cluster☆16Feb 26, 2025Updated last year
- RNA dependent RNA Polymerase Palmprint Analysis☆12Aug 1, 2024Updated last year
- an R package to biotype a community☆14Oct 19, 2021Updated 4 years ago
- Improving genome bins through the combination of different binning programs☆31Jan 30, 2023Updated 3 years ago
- Deep neural network based prediction model for gene essentiality prediction in microbes☆10Feb 11, 2021Updated 5 years ago
- ☆32Jan 4, 2025Updated last year
- (formerly eelpond) an automated RNA-Seq workflow system☆27Oct 14, 2020Updated 5 years ago
- ☆19Dec 6, 2022Updated 3 years ago
- Extract lineage CSVs from NCBI for use with sourmash lca.☆29Oct 4, 2023Updated 2 years ago
- Working with the outputs of sourmash in R☆28Jan 15, 2026Updated 2 months ago
- ☆15Oct 7, 2025Updated 5 months ago
- The Ross-Ibarra's lab documentation☆26Aug 4, 2022Updated 3 years ago
- A tutorial for Metagenome-Atlas☆23Nov 24, 2023Updated 2 years ago
- SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customi…☆63Mar 25, 2024Updated last year
- Specifications for PacBio® native file formats☆31Nov 19, 2024Updated last year
- Microbiome Classifier Pipeline for Pacific Biosciences 16s Data☆11Jan 22, 2024Updated 2 years ago
- 解构R语言中的“黑魔法”☆17Jun 11, 2015Updated 10 years ago
- Working example of snakemake tutorial using UAB Cheaha computing cluster via SLURM scheduler☆10Nov 8, 2018Updated 7 years ago
- Repository of our application for human-augmented binning☆27Apr 26, 2021Updated 4 years ago
- ☆26Jun 26, 2025Updated 8 months ago
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆25Feb 25, 2023Updated 3 years ago
- ☆16Feb 11, 2022Updated 4 years ago
- Gene Family Annotation Workflow☆11Mar 26, 2024Updated last year
- ☆15Apr 3, 2025Updated 11 months ago
- Tools and utilities for making use of mastiff☆12Mar 10, 2023Updated 3 years ago
- R Interface to the ClassyFire REST API☆12Feb 21, 2025Updated last year
- Materials for Analyzing Next-Generation Sequencing (ANGUS) course.☆106Jan 21, 2023Updated 3 years ago
- A handwash monitoring application using the real-time action recognition algorithm.☆15Apr 19, 2020Updated 5 years ago
- Metagenomic binning suite☆29Sep 30, 2022Updated 3 years ago
- kProcessor: kmers processing framework.☆10Oct 1, 2023Updated 2 years ago
- Tool (experimental) to compute layout from overlaps with spectral algorithm☆11Nov 28, 2017Updated 8 years ago
- An R Markdown template using the bookdown package for preparing a PhD thesis at the University of California Davis☆16Dec 6, 2023Updated 2 years ago