ukhsa-collaboration / PHEnix
Public Health England SNP calling pipeline.
☆36Updated 6 years ago
Alternatives and similar repositories for PHEnix:
Users that are interested in PHEnix are comparing it to the libraries listed below
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Merge transcriptome assemblies☆30Updated 8 years ago
- Using kallisto for metagenomic analysis