Text Only Genome Viewer!
☆248May 14, 2026Updated last week
Alternatives and similar repositories for ASCIIGenome
Users that are interested in ASCIIGenome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A read extraction and realignment tool for next generation sequencing data☆108Oct 29, 2022Updated 3 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆46Jan 18, 2019Updated 7 years ago
- conda recipes for genomic data☆84Jul 31, 2021Updated 4 years ago
- fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing☆851May 2, 2026Updated 3 weeks ago
- goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary☆226Sep 18, 2025Updated 8 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Microassembly based somatic variant caller for NGS data☆154Jun 23, 2022Updated 3 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Dec 26, 2023Updated 2 years ago
- Tools for early stage alignment file processing☆96Mar 12, 2019Updated 7 years ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Jun 28, 2017Updated 8 years ago
- Bayesian haplotype-based mutation calling☆323Feb 13, 2026Updated 3 months ago
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆212Aug 21, 2024Updated last year
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,555Updated this week
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆104Jan 12, 2026Updated 4 months ago
- Simple tool to verticalize text delimited files.☆37May 6, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- a wee tool for random access into BGZF files.☆86May 10, 2018Updated 8 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Dec 15, 2022Updated 3 years ago
- Classify sequencing reads using MinHash.☆48Apr 6, 2020Updated 6 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- tools for working with genome variation graphs☆1,320Updated this week
- A C library for handling bigWig files☆81Jan 17, 2025Updated last year
- Genome browser and variant annotation☆396May 12, 2026Updated 2 weeks ago
- An efficient FASTQ manipulation suite☆139Jan 27, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- C++ htslib/bwa-mem/fermi interface for interrogating sequence data☆139Apr 27, 2026Updated 3 weeks ago
- Docker images of bioinformatics software☆21Jun 15, 2017Updated 8 years ago
- RNA mapping pipeline☆19Jun 3, 2018Updated 7 years ago
- The next version of bwa-mem☆834Oct 15, 2025Updated 7 months ago
- genes and genomes at your fingertips☆412Mar 5, 2026Updated 2 months ago
- sort genomic data☆36Nov 7, 2025Updated 6 months ago
- Sequence-to-graph mapper and graph generator☆478Aug 11, 2025Updated 9 months ago
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆261Dec 13, 2025Updated 5 months ago
- Genome inference from a population reference graph☆96Apr 1, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆368Jun 6, 2025Updated 11 months ago
- De novo estimates of genetic relatedness from next-gen sequencing data☆45Jul 28, 2019Updated 6 years ago
- Aggregate results from bioinformatics analyses across many samples into a single report.☆1,451Updated this week
- Plot structural variant signals from many BAMs and CRAMs☆567Jul 13, 2024Updated last year
- Disty McMatrixface - compute a distance matrix from a core genome alignment file☆15Mar 15, 2023Updated 3 years ago
- a pileup library that embraces the huge☆43Oct 2, 2020Updated 5 years ago
- De novo genome assembly and multisample variant calling☆112Mar 28, 2019Updated 7 years ago