marbl / MUMmer3Links
MUMmer3
☆17Updated 3 years ago
Alternatives and similar repositories for MUMmer3
Users that are interested in MUMmer3 are comparing it to the libraries listed below
Sorting:
- MetaCarvel: A scaffolder for metagenomes☆14Updated last year
- Find Unique genomic Regions☆32Updated 3 weeks ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 6 months ago
- Differential k-mer analysis☆37Updated last year
- ☆30Updated 2 years ago
- ☆28Updated last year
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆35Updated 4 months ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆29Updated 7 months ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated 2 months ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- ☆28Updated 7 months ago
- ☆10Updated 11 months ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- ☆45Updated this week
- Fast and space-efficient taxonomic classification of long reads☆43Updated 2 months ago
- ⚡️🧬 FastMLST: A multi-core tool for multilocus sequence typing of draft genome assemblies☆27Updated last month
- Symmetric DUST for finding low-complexity regions in DNA sequences☆45Updated 3 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- transposable element typing pipeline☆19Updated last year
- Scaffolding with Ultralong Reads☆15Updated 5 years ago
- Read contamination removal☆25Updated last year
- Strain-level haplotyping for metagenomes with short or long-reads.☆56Updated 7 months ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 6 years ago
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆45Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 5 years ago
- ☆32Updated 2 years ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆45Updated 2 years ago
- VStrains is a de novo approach for reconstructing strains from viral quasispecies.☆23Updated 9 months ago
- compare sequences to a shared root reference sequence.☆24Updated 4 years ago
- Fast in-silico normalization algorithm for NGS data☆23Updated 4 years ago