Nanguage / bioViewLinks
Readability enhancement tool for bioinformatics data file format
☆29Updated 6 years ago
Alternatives and similar repositories for bioView
Users that are interested in bioView are comparing it to the libraries listed below
Sorting:
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Visualization tool for genetic reassortment☆21Updated 2 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- pathway based data integration and visualization☆43Updated 9 months ago
- Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxfo…☆20Updated 6 years ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated 6 months ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated last year
- The command-line interface to GGD☆43Updated 3 years ago
- Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach☆36Updated 15 years ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Updated last month
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 7 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆24Updated 4 years ago
- ☆28Updated 2 years ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated 10 months ago
- Differential ATAC-seq toolkit☆27Updated 2 years ago
- A high-performance search engine for large-scale genomic interval datasets☆19Updated 4 years ago
- A straightforward and complete next-generation sequencing read simulator☆22Updated last year
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆28Updated 8 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated 2 months ago
- BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy …☆72Updated last year
- miRge - microRNA alignment software for small RNA-seq data, now at v2.0☆27Updated 3 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- A wrapper to Heng Li's kseq/readfq, an efficient FastQ/Fasta parser☆15Updated 2 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago