Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 20th of March 2018.
☆10Jan 12, 2019Updated 7 years ago
Alternatives and similar repositories for toast2018
Users that are interested in toast2018 are comparing it to the libraries listed below
Sorting:
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Jan 8, 2016Updated 10 years ago
- (a) (p)erfect (c)ircle? ... tests DNA sequences for overlapping ends, then trims and rejoins, and aligns reads to test the join☆11Apr 29, 2021Updated 4 years ago
- Digital Database of Microbial Phenotypes. Like an online Bergey's Manual.☆13Mar 1, 2012Updated 13 years ago
- Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) …☆14Nov 20, 2018Updated 7 years ago
- Annotate your metagenome assemblies☆11Jul 19, 2018Updated 7 years ago
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated last year
- The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service component…☆11Sep 22, 2020Updated 5 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 6 months ago
- Parse scientific names using gnparser (https://github.com/gnames/gnparser)☆15Jan 1, 2026Updated last month
- Experiments with using BIGSI data structure for metagenomic and QC applications☆19Aug 12, 2024Updated last year
- A place to put docker build files☆13Oct 3, 2023Updated 2 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Jun 16, 2024Updated last year
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Dec 5, 2018Updated 7 years ago
- Crowdsourcing a directory of cryptids and their range maps.☆20Jul 16, 2023Updated 2 years ago
- METAREP: JCVI Metagenomics Reports - an open source tool for high-performance comparative metagenomics☆26Mar 21, 2013Updated 12 years ago
- R tool to analyse and integrate multiple -omics data☆15Jan 4, 2026Updated last month
- a versatile toolkit for processing and analyzing diverse types of sequence data