ekg / thesis
my PhD thesis
☆36Updated 5 years ago
Alternatives and similar repositories for thesis:
Users that are interested in thesis are comparing it to the libraries listed below
- URMAP ultra-fast read mapper☆38Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 2 years ago
- Population-wide Deletion Calling☆35Updated 4 months ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆54Updated last year
- Exploration of controlled loss of quality values for compressing CRAM files☆34Updated last year
- Graphite - Graph-based variant adjudication☆28Updated 3 years ago
- ☆21Updated 5 years ago
- Scripts for implementing read until and other examples.☆31Updated 4 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Approach to identify simple and complex structural genomic rearrangements using a randomized approach☆21Updated 6 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆27Updated 6 years ago
- Symmetric DUST for finding low-complexity regions in DNA sequences☆34Updated last year
- Remove primer sequence from BAM alignments by soft-clipping☆31Updated 5 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆47Updated 5 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- Nextflow workflow syntax highlighting and snippets for Sublime Text 4☆24Updated 3 weeks ago
- ☆34Updated 4 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆52Updated 4 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 7 years ago
- Find Unique genomic Regions☆29Updated 3 weeks ago
- Scaffolding genomes using synthetic long read clouds☆20Updated 8 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 8 years ago
- Identifying repeats in high-throughput sequencing data☆15Updated 9 months ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆30Updated last year
- Analysis tool for Nanopore sequencing data☆33Updated 5 years ago
- ☆28Updated last year
- Population-scale detection of novel sequence insertions☆27Updated 2 years ago