neurorestore / DE-analysisLinks
☆39Updated 4 years ago
Alternatives and similar repositories for DE-analysis
Users that are interested in DE-analysis are comparing it to the libraries listed below
Sorting:
- ☆33Updated last year
- scWGCNA☆61Updated 3 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆46Updated last year
- Single-cell Case Control Analysis☆52Updated this week
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Updated 3 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 4 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆96Updated 8 months ago
- ☆53Updated last year
- R package IReNA☆29Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- Functional Inference of Gene Regulation☆51Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- ☆39Updated 5 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Coarse-graining of large single-cell RNA-seq data into metacells☆92Updated last month
- ☆34Updated 6 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- ☆48Updated last year
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- ☆46Updated 2 months ago
- mutation(barcode) caller for 10x single cell data☆44Updated 5 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated last year
- ☆47Updated 5 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 4 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last week
- ☆50Updated 6 years ago