oganm / homologeneView external linksLinks
An r package that works as a wrapper to homologene
☆49Nov 2, 2023Updated 2 years ago
Alternatives and similar repositories for homologene
Users that are interested in homologene are comparing it to the libraries listed below
Sorting:
- Quick access to gene synonyms☆29Feb 8, 2026Updated last week
- scRNA-seq data visualization from scrattch☆29Aug 20, 2025Updated 5 months ago
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated last year
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆12Dec 27, 2023Updated 2 years ago
- Allen Brain Atlas utilities, parsers and data structures☆11Jun 25, 2017Updated 8 years ago
- Single Cell Oriented Reconstruction of PANDA-based Individually Optimized Networks☆28Feb 5, 2026Updated last week
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆125Apr 16, 2025Updated 9 months ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Apr 12, 2023Updated 2 years ago
- Gene orthologs for model organisms in a tidy data format☆14Sep 29, 2022Updated 3 years ago
- MERFISH decoding software☆26Aug 16, 2025Updated 6 months ago
- Acquiring images from allen brain atlas, mouse ISH experiments in R.☆17Mar 20, 2024Updated last year
- Framework for running text mining tools on latest publications. Main page at:☆14Jul 13, 2022Updated 3 years ago
- Gene expression in neuroexpresso database☆18Oct 25, 2024Updated last year
- 🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 �…☆51Jan 25, 2026Updated 3 weeks ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆29Nov 27, 2025Updated 2 months ago
- R package for testing and visualizing gene list overlaps☆19Aug 22, 2016Updated 9 years ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆107Aug 2, 2023Updated 2 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Dec 9, 2021Updated 4 years ago
- Code and analyses from "FDR: A New Deal" paper☆15Apr 18, 2017Updated 8 years ago
- mutation(barcode) caller for 10x single cell data☆44Jun 14, 2020Updated 5 years ago
- See: https://www.iscb.org/ismb2018/3511#am1☆18Sep 10, 2018Updated 7 years ago
- Code and manuscript files for Aaron and Karsten's deconvolution paper.☆16Nov 18, 2018Updated 7 years ago
- Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)☆34Oct 6, 2022Updated 3 years ago
- A package to help convert different single-cell data formats to each other☆455Feb 28, 2024Updated last year
- ARCHS4 RNA-seq processing scripts and web server pages.☆61Nov 26, 2020Updated 5 years ago
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Oct 20, 2020Updated 5 years ago
- Clone of the Bioconductor repository for the batchelor package.☆18Mar 13, 2025Updated 11 months ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 2 years ago
- R package implementation of Milo for testing for differential abundance in KNN graphs☆414Sep 4, 2025Updated 5 months ago
- Conversion between scRNA-seq objects☆198Jan 12, 2026Updated last month
- Brings SingleCellExperiment objects to the tidyverse☆37Nov 10, 2025Updated 3 months ago
- scWGCNA☆61Nov 8, 2022Updated 3 years ago
- Lightweight Iterative Gene set Enrichment in R☆58Oct 3, 2024Updated last year
- Context specific and dynamic gene regulatory network reconstruction and analysis☆127Nov 24, 2025Updated 2 months ago
- Predicted cell-cell interactions of the aging mouse brain☆20Sep 24, 2019Updated 6 years ago
- Functions for handling RNA-seq files and formats as input and output for scrattch functions.☆11Aug 20, 2025Updated 5 months ago
- Analysis code and results for dreamlet☆10Jul 18, 2025Updated 6 months ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11May 25, 2023Updated 2 years ago