analysis script for GBM single cell RNA seq data
☆22May 26, 2021Updated 4 years ago
Alternatives and similar repositories for scRNA_GBM
Users that are interested in scRNA_GBM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- ☆18Oct 4, 2022Updated 3 years ago
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆25Dec 11, 2023Updated 2 years ago
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Dec 7, 2022Updated 3 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆56Jan 6, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆63Dec 27, 2023Updated 2 years ago
- A guide for analyzing single-cell RNA-seq data using the R package Seurat. Go from raw data to cell clustering, identifying cell types, c…☆29Feb 19, 2020Updated 6 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆17Jun 28, 2025Updated 10 months ago
- ☆11May 30, 2023Updated 2 years ago
- Implementation of Seurat's SpatialFeaturePlot to allow blended expression☆11Feb 28, 2025Updated last year
- Single-cell Lung Cancer Atlas with 1.2M cells☆92Jan 19, 2025Updated last year
- ☆34Jan 26, 2022Updated 4 years ago
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆153Jan 6, 2021Updated 5 years ago
- ☆39Aug 4, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆72Apr 17, 2024Updated 2 years ago
- ☆46May 3, 2021Updated 5 years ago
- scEntropy method and scEGMM framework☆18Oct 26, 2019Updated 6 years ago
- Python 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)☆37Oct 18, 2024Updated last year
- R Package for Single-Cell Dataset Processing and Visualization☆66Jul 26, 2021Updated 4 years ago
- Analysis of single cell RNA-seq data from innate lympoid cells☆15Aug 8, 2017Updated 8 years ago
- Use LSTM neural network for 1D distributional data prediction☆22Sep 29, 2022Updated 3 years ago
- Functions for single cell data analysis☆32May 28, 2021Updated 4 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Jun 21, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Sep 16, 2023Updated 2 years ago
- ☆50Jan 16, 2020Updated 6 years ago
- ☆12Jan 8, 2026Updated 4 months ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆54Dec 1, 2025Updated 5 months ago
- Code for the spatial transcriptomic paper on IPF lungs☆22Jul 18, 2024Updated last year
- Mapping the Functional Landscape of TCR Repertoire☆36Oct 8, 2021Updated 4 years ago
- Tensor Switching Networks☆12Nov 2, 2017Updated 8 years ago
- ☆11Jul 8, 2024Updated last year
- ☆24Oct 31, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reproducibility repository for the Human Neural Organoid Atlas publication☆48Dec 16, 2024Updated last year
- Single-Cell Sequencing Quality Control and Processing Software☆30Sep 16, 2019Updated 6 years ago
- Pan-cancer human brain metastases atlas at single-cell resolution☆24Apr 3, 2025Updated last year
- Code repository for single cell RNA-seq☆42Oct 12, 2020Updated 5 years ago
- An R package for handling and analysing imaging mass cytometry data☆31Apr 24, 2026Updated 2 weeks ago
- ☆33Feb 26, 2025Updated last year
- ☆12Mar 18, 2026Updated last month