mbourgey / scRNA_GBMLinks
analysis script for GBM single cell RNA seq data
☆21Updated 4 years ago
Alternatives and similar repositories for scRNA_GBM
Users that are interested in scRNA_GBM are comparing it to the libraries listed below
Sorting:
- ☆50Updated 5 years ago
- ☆58Updated last year
- ☆14Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- ☆37Updated 2 years ago
- ☆22Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆50Updated 7 months ago
- Single-Cell Inference of Class Switch Recombination☆19Updated 5 months ago
- ☆13Updated 2 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated last month
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆88Updated last month
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 8 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆32Updated last year
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆56Updated 3 months ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆36Updated 2 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 2 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Collection of scripts for analysis of pan fetal immune atlas☆27Updated 3 years ago
- Single-cell Case Control Analysis☆52Updated 9 months ago
- All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs☆41Updated 2 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year