Alternatives and similar repositories for MANAscore

Users that are interested in MANAscore are comparing it to the libraries listed below

• Chuxj / CRC-atlas
  ☆31Updated last year
• christophhmayr / 2023_Mayr
  Code for the spatial transcriptomic paper on IPF lungs
  ☆19Updated last year
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆28Updated last year
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆26Updated 6 months ago
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆38Updated last year
• SunXQlab / scMLnet
  Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks
  ☆27Updated 4 years ago
• Teichlab / SKM_ageing_atlas
  ☆12Updated last year
• kaifuchenlab / MEBOCOST
  ☆27Updated last week
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆22Updated 3 years ago
• Teichlab / PanGIAtlas
  Integration of gut cell atlases
  ☆27Updated 6 months ago
• liziyie / Onco-fetal-CAF-in-HCC
  ☆20Updated last year
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆31Updated 3 years ago
• Fraternalilab / sciCSR
  Single-Cell Inference of Class Switch Recombination
  ☆19Updated 5 months ago
• ma-jq / B
  ☆25Updated last year
• ChanLab-UTSW / BreastCancer_Integrated
  ☆30Updated 5 months ago
• shanzha9 / siAgeModel
  ☆12Updated last year
• tiroshlab / Spatial_Glioma
  Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
  ☆50Updated 7 months ago
• ChanghanGitHub / exFINDER
  Identifying external communication signals using single-cell transcriptomics data
  ☆20Updated last year
• QiangShiPKU / CoVarNet
  ☆39Updated 2 weeks ago
• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆42Updated 2 years ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆48Updated 2 months ago
• zhang-bin-98 / A-spatial-transcriptome-landscape-of-mouse-aging
  ☆13Updated 9 months ago
• marcalva / hcc_sc_2022
  HCC single cell analysis for Alvarez, Benhammou et al.
  ☆17Updated 3 years ago
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆18Updated 11 months ago
• wu-yc / neutrophil
  ☆15Updated 2 years ago
• bio-Pixel / panVC
  ☆51Updated last year
• guangchunhan / LUAD_Code
  ☆21Updated 2 years ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• jumphone / Vector
  Unsupervised Inference of Developmental Directions for Single Cells
  ☆22Updated last year
• dengchunyu / scPagwas
  Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data
  ☆17Updated 9 months ago