mstritt / orbit-image-analysisLinks
A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.
☆59Updated 4 years ago
Alternatives and similar repositories for orbit-image-analysis
Users that are interested in orbit-image-analysis are comparing it to the libraries listed below
Sorting:
- Lazily load multiscale whole-slide images with openslide and dask☆34Updated 3 years ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆133Updated this week
- multimodal whole slide image registration in a graph structure☆100Updated last year
- ☆24Updated 2 years ago
- GPU-accelerated image processing in QuPath☆16Updated 4 years ago
- ☆73Updated 3 weeks ago
- A whole-slide image reader for TensorFlow☆24Updated 2 months ago
- AICS Segmentation (One-Way) Mirror☆45Updated 5 years ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 6 years ago
- PAthological QUpath Obsession - QuPath and Python conversations☆133Updated 5 months ago
- Bio-Formats image file format to raw format converter☆103Updated last month
- simple package for augmentation of n-dimensional arrays☆34Updated 2 years ago
- FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytopla…☆32Updated 4 years ago
- ☆32Updated 6 months ago
- Delete the label from a whole-slide image☆65Updated 4 years ago
- Python tools for creating and manipulating OME-TIFF multi-resolution pyramid images.☆18Updated 6 months ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 4 years ago
- Read and write life sciences file formats☆142Updated 7 months ago
- Piecewise alignment for layers of mosaics☆35Updated 5 months ago
- An open-source digital pathology based rapid image annotation tool☆90Updated last week
- Raw format to OME-TIFF converter☆56Updated 2 weeks ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆70Updated last year
- Cloud-based data annotation tools for biological images☆84Updated last year
- ☆24Updated 5 years ago
- A Girder plugin for pathology image annotations and analysis.☆79Updated 3 weeks ago
- A library to facilitate machine learning on multi-dimensional images.☆87Updated last week
- Easily read and write ome-tiff images in python☆28Updated last year
- Python image segmentation plugin☆31Updated 5 years ago
- ☆31Updated 4 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago