Alternatives and similar repositories for kaibu

Users that are interested in kaibu are comparing it to the libraries listed below

• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆34Updated last month
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆17Updated last month
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆50Updated last month
• fractal-analytics-platform / ngio
  NGIO is a Python library to streamline OME-Zarr image analysis workflows.
  ☆14Updated last week
• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆17Updated last month
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 3 months ago
• morphometrics / morphometrics
  ☆20Updated last year
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆33Updated this week
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆56Updated last week
• ome-zarr-models / ome-zarr-models-py
  A minimal Python package for reading OME-Zarr (meta)data
  ☆29Updated this week
• lowe-lab-ucl / arboretum
  Track and lineage visualization with btrack and Napari
  ☆45Updated 7 months ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated last month
• AllenCellModeling / napari-aicsimageio
  Multiple file format reading directly into napari using pure Python
  ☆36Updated 10 months ago
• haesleinhuepf / napari-assistant
  ☆25Updated last month
• napari / napari-plugin-template
  A template repo used to make new napari plugins
  ☆23Updated 3 weeks ago
• allen-cell-animated / agave
  ☆43Updated this week
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated last month
• jni / affinder
  Quickly find the affine matrix mapping one image to another using manual correspondence points annotation
  ☆20Updated 2 months ago
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 3 years ago
• haesleinhuepf / natari
  Napari gaming
  ☆17Updated 3 years ago
• glencoesoftware / NGFF-Converter
  NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF
  ☆27Updated last year
• thewtex / ngff-zarr
  A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.
  ☆40Updated last week
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆56Updated 3 months ago
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆27Updated last year
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆26Updated this week
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆56Updated last month
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated 3 weeks ago
• bioimage-io / core-bioimage-io-python
  Python libraries for loading, running and packaging bioimage.io models
  ☆31Updated last week
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 2 months ago