Curated metadata for all studies published in the Image Data Resource
☆17May 19, 2026Updated 3 months ago
Alternatives and similar repositories for idr-metadata
Users that are interested in idr-metadata are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- Jupyter Notebooks for the Image Data Resource☆19Jun 25, 2026Updated 2 months ago
- Deployment infrastructure for the Image Data Resource☆14Feb 21, 2026Updated 6 months ago
- QuPath extension to work with images through OMERO's web API☆10Feb 10, 2026Updated 6 months ago
- Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar☆13Oct 30, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆22May 8, 2023Updated 3 years ago
- ☆12Aug 23, 2018Updated 8 years ago
- Semantic data model of the set of common data elements for rare disease registration☆12Oct 26, 2023Updated 2 years ago
- mcib3d core library for 3D ImageJ suite☆16Oct 6, 2022Updated 3 years ago
- ☆24Aug 27, 2020Updated 6 years ago
- A repository for data package representation for cell tracking data☆13Apr 30, 2020Updated 6 years ago
- Galaxy Docker repository with Imaging tools (Galaxy Imaging flavour)☆12Jan 11, 2026Updated 7 months ago
- Reading HDF5 files with Zarr☆12Oct 5, 2021Updated 4 years ago
- JSON validator derived from AJV supporting ontology and taxonomy validation.☆23May 22, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An interactive machine learning framework for large histopathology images.☆21Dec 27, 2023Updated 2 years ago
- OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological …☆222Aug 21, 2026Updated last week
- 🚚 AutoTx 🪄 - a smart background file transfer service for Windows.☆32Aug 19, 2026Updated 2 weeks ago
- Examples and code for optical pooled screens☆10Dec 8, 2022Updated 3 years ago
- simple package for augmentation of n-dimensional arrays☆33Aug 10, 2023Updated 3 years ago
- Generate markdown notebooks from ImageJ Macro☆33Mar 17, 2021Updated 5 years ago
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆14Feb 4, 2019Updated 7 years ago
- This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…☆50Apr 30, 2017Updated 9 years ago
- Code for my master's thesis. Instance segmentation of fluorescence microscopy images with deep learning.☆44Jul 25, 2018Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The repository of NEUBIAS textbook 2021☆10Jan 24, 2022Updated 4 years ago
- Render transformed image tiles☆37Updated this week
- ☆46Oct 15, 2025Updated 10 months ago
- OMERO.web app to support an image viewer based on OpenSeadragon☆31Dec 9, 2022Updated 3 years ago
- Materials accompanying the upstrap paper☆12Oct 19, 2020Updated 5 years ago
- A collection of demonstration materials for MorphoLibJ.☆12Jan 12, 2023Updated 3 years ago
- An OMERO CLI plugin for creating transfer packets between OMERO servers.☆19Jun 5, 2026Updated 2 months ago
- ☆10Nov 5, 2020Updated 5 years ago
- Experimental micro-service for implementing the Zarr spec over HTTP☆21May 25, 2026Updated 3 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Analysis of results of the Data Science Bowl 2018☆22Jun 16, 2020Updated 6 years ago
- This repository provides an interface in MATLAB to read and write Zarr files. Zarr is a file format for scientific data (like HDF5 and ne…☆19Jul 21, 2026Updated last month
- ☆45Aug 26, 2026Updated last week
- dockerfile for docker image with nvidia-pytorch-tensorflow-conda-jupyter-ssh☆21Sep 30, 2025Updated 11 months ago
- DSDE Deep Learning Club☆40Mar 28, 2019Updated 7 years ago
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- READMEs for RxRx.ai datasets☆29Jun 6, 2025Updated last year