Curated metadata for all studies published in the Image Data Resource
☆16Aug 5, 2025Updated 7 months ago
Alternatives and similar repositories for idr-metadata
Users that are interested in idr-metadata are comparing it to the libraries listed below
Sorting:
- Jupyter Notebooks for the Image Data Resource☆19Feb 20, 2026Updated last week
- QuPath extension to work with images through OMERO's web API☆10Feb 10, 2026Updated 3 weeks ago
- Introduction to Python Programming☆11Mar 31, 2020Updated 5 years ago
- Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar☆13Oct 30, 2023Updated 2 years ago
- Galaxy Docker repository with Imaging tools (Galaxy Imaging flavour)☆12Jan 11, 2026Updated last month
- Deployment infrastructure for the Image Data Resource☆14Feb 21, 2026Updated last week
- mcib3d core library for 3D ImageJ suite☆15Oct 6, 2022Updated 3 years ago
- ☆22May 8, 2023Updated 2 years ago
- A repository for data package representation for cell tracking data☆13Apr 30, 2020Updated 5 years ago
- An interactive machine learning framework for large histopathology images.☆21Dec 27, 2023Updated 2 years ago
- Code for my master's thesis. Instance segmentation of fluorescence microscopy images with deep learning.☆44Jul 25, 2018Updated 7 years ago
- ☆24Aug 27, 2020Updated 5 years ago
- Microsopic Image Analyzer (MIA)☆28Aug 19, 2025Updated 6 months ago
- A high content analysis method to study skeletal muscle☆12Apr 26, 2024Updated last year
- AutoTx - an intelligent background file transfer service for Windows.☆28Feb 13, 2026Updated 2 weeks ago
- Atlas of Digital Pathology for Deep Learning [CVPR2019]☆25Jun 22, 2020Updated 5 years ago
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆59Apr 16, 2021Updated 4 years ago
- Generate markdown notebooks from ImageJ Macro☆26Mar 17, 2021Updated 4 years ago
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆35Nov 26, 2025Updated 3 months ago
- Online documentation and reference for CLIJ☆28May 21, 2021Updated 4 years ago
- This module allows users to analyze k-means & hierarchical clustering, and visualize results of Principal Component, Correspondence Analy…☆10Feb 16, 2026Updated 2 weeks ago
- Deploy Jupyter on your cloud provider of choice☆32Feb 23, 2026Updated last week
- This module is a tool for calculating correlations such as Partial, Tetrachoric, Intraclass correlation coefficients, Bootstrap agreement…☆11Feb 16, 2026Updated 2 weeks ago
- A napari plugin for zarr backed OME-NGFF images☆45Updated this week
- Render transformed image tiles☆35Feb 17, 2026Updated 2 weeks ago
- simple package for augmentation of n-dimensional arrays☆34Aug 10, 2023Updated 2 years ago
- ☆13Feb 20, 2026Updated last week
- OMERO.web app to support an image viewer based on OpenSeadragon☆31Dec 9, 2022Updated 3 years ago
- Materials for RStudio Instructor Training - Part 3: Teaching R and Data Science with RStudio☆11Aug 13, 2020Updated 5 years ago
- R syndRomics package☆14May 20, 2025Updated 9 months ago
- Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation☆11Dec 19, 2016Updated 9 years ago
- Repository for vLume releases and changes☆10Oct 12, 2020Updated 5 years ago
- a collection of R functions for data manipulation, data analysis, and plotting☆13Oct 29, 2020Updated 5 years ago
- Python port of the libqxt SpanSlider☆15Jul 25, 2017Updated 8 years ago
- Predicting Cell Health with Morphological Profiles☆39Jan 26, 2022Updated 4 years ago
- ☆10Apr 16, 2022Updated 3 years ago
- Structural Equation Models based on lavaan for jamovi☆11Sep 24, 2025Updated 5 months ago
- This repository provides an interface in MATLAB to read and write Zarr files. Zarr is a file format for scientific data (like HDF5 and ne…☆18Jan 9, 2026Updated last month
- MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses.☆11Jul 25, 2024Updated last year