apeer-micro / apeer-ometiff-libraryLinks
Easily read and write ome-tiff images in python
☆28Updated last year
Alternatives and similar repositories for apeer-ometiff-library
Users that are interested in apeer-ometiff-library are comparing it to the libraries listed below
Sorting:
- ☆23Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 10 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 3 months ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated last week
- Visualizing feature measurements on label images in napari☆10Updated last year
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated last month
- native Python dataclasses for the OME data model☆65Updated last week
- ☆22Updated 2 years ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 10 months ago
- Command-line client for Fractal☆47Updated this week
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- Python image segmentation plugin☆31Updated 5 years ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated 3 months ago
- MultiModal Big Image Data Sharing and Exploration☆18Updated 3 years ago
- ☆41Updated 3 weeks ago
- Process images using SimpleITK in napari☆23Updated 8 months ago
- High quality visualization for volumetric image data☆54Updated last week
- python tools for BigDataViewer☆22Updated last year
- Raw format to OME-TIFF converter☆56Updated last month
- Image registration (alignment) software for large microscopy images☆27Updated 2 years ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 9 months ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- A multi-dimensional spatial image data structure for scientific Python.☆43Updated 5 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated 2 months ago
- A napari plugin for clustering objects according to their properties.☆89Updated last week
- Gamified image segmentation quality estimation☆19Updated 8 months ago
- ☆36Updated last year