Easily read and write ome-tiff images in python
☆28May 6, 2024Updated last year
Alternatives and similar repositories for apeer-ometiff-library
Users that are interested in apeer-ometiff-library are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- native Python dataclasses for the OME data model☆65Apr 2, 2026Updated 2 weeks ago
- ☆17Jul 10, 2025Updated 9 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Apr 4, 2025Updated last year
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- AICS ML Segmentation (One-Way) Mirror☆28May 2, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆23Mar 26, 2021Updated 5 years ago
- OME model (specification, code generator, implementation)☆16Jan 22, 2026Updated 2 months ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆222Dec 1, 2025Updated 4 months ago
- Image Cytometry Standard file reading and writing.☆18Jan 5, 2026Updated 3 months ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆61Jul 18, 2025Updated 9 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 4 years ago
- Image registration (alignment) software for large microscopy images☆27Oct 15, 2023Updated 2 years ago
- AICS Segmentation (One-Way) Mirror☆45Dec 16, 2020Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆19Apr 1, 2026Updated 2 weeks ago
- CODEX data processing code☆12Jul 1, 2025Updated 9 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆73Apr 6, 2026Updated 2 weeks ago
- Various parts made for fluorescence microscopy + optics work☆17Jul 22, 2019Updated 6 years ago
- Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.☆56Jan 14, 2026Updated 3 months ago
- A registry of tutorials, workshop material, videos and other educational resources to help you learn more about DataLad.☆17Aug 3, 2023Updated 2 years ago
- This is a repository for the Automated Microscopy Control Environment.☆10Jan 6, 2022Updated 4 years ago
- The python-microscopy environment - an open-source package for light microscopy☆97Mar 26, 2026Updated 3 weeks ago
- ☆18Nov 25, 2025Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Deep Zoom Plate Viewer for microscopy images☆18Updated this week
- Microscopy Image Cytometry Toolkit☆115Jul 15, 2022Updated 3 years ago
- Read Olympus image files (OIF and OIB).☆13Feb 9, 2026Updated 2 months ago
- Acquisition and Analysis Protocol for Quantitative MRI of the Spinal Cord☆13May 28, 2025Updated 10 months ago
- Yet Another Pixel Classifier (based on deep learning)☆36Jun 27, 2024Updated last year
- Pair correlation function analysis of fluorescence fluctuations in big image time series.☆10Feb 25, 2026Updated last month
- A Python script used to stitch a two-dimensional grid of tiles into a mosaic☆31Jul 15, 2024Updated last year
- ☆15Feb 24, 2026Updated last month
- Fiji module for image transformation and related algorithms☆71Oct 16, 2025Updated 6 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Dec 4, 2025Updated 4 months ago
- CytoData 2016 – origin story☆18Sep 15, 2017Updated 8 years ago
- Django-based OMERO.web client☆23Mar 16, 2026Updated last month
- ilastik plugin for napari☆15Mar 2, 2026Updated last month
- Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy E…☆418Mar 18, 2026Updated last month
- Leica Image Format (LIF) file reader for Python☆38Mar 26, 2026Updated 3 weeks ago
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆59Apr 16, 2021Updated 5 years ago