Easily read and write ome-tiff images in python
☆28May 6, 2024Updated 2 years ago
Alternatives and similar repositories for apeer-ometiff-library
Users that are interested in apeer-ometiff-library are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- native Python dataclasses for the OME data model☆68Apr 2, 2026Updated 4 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Apr 4, 2025Updated last year
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- AICS ML Segmentation (One-Way) Mirror☆28May 2, 2021Updated 5 years ago
- ☆23Mar 26, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆221Dec 1, 2025Updated 8 months ago
- Image Cytometry Standard file reading and writing.☆18Jan 5, 2026Updated 7 months ago
- OME model (specification, code generator, implementation)☆17Aug 7, 2026Updated 3 weeks ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆61Aug 11, 2026Updated 2 weeks ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- Image registration (alignment) software for large microscopy images☆27Oct 15, 2023Updated 2 years ago
- AICS Segmentation (One-Way) Mirror☆45Dec 16, 2020Updated 5 years ago
- ☆17Jul 10, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- CODEX data processing code☆13Jul 1, 2025Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆74Aug 3, 2026Updated 3 weeks ago
- Various parts made for fluorescence microscopy + optics work☆19Jul 22, 2019Updated 7 years ago
- Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.☆56Jan 14, 2026Updated 7 months ago
- The python-microscopy environment - an open-source package for light microscopy☆100Updated this week
- A registry of tutorials, workshop material, videos and other educational resources to help you learn more about DataLad.☆17Aug 3, 2023Updated 3 years ago
- This is a repository for the Automated Microscopy Control Environment.☆10Jan 6, 2022Updated 4 years ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆181Aug 7, 2026Updated 3 weeks ago
- ☆18Nov 25, 2025Updated 9 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Full Docs @ https://skalalab.github.io/flim_playground_doc/☆16Updated this week
- Deep Zoom Plate Viewer for microscopy images☆18Jul 21, 2026Updated last month
- Microscopy Image Cytometry Toolkit☆117Jul 15, 2022Updated 4 years ago
- Read Olympus image files (OIF and OIB).☆13Feb 9, 2026Updated 6 months ago
- Yet Another Pixel Classifier (based on deep learning)☆36Jun 27, 2024Updated 2 years ago
- Acquisition and Analysis Protocol for Quantitative MRI of the Spinal Cord☆13May 28, 2025Updated last year
- Leica Image Format (LIF) file reader for Python☆39Mar 26, 2026Updated 5 months ago
- Pair correlation function analysis of fluorescence fluctuations in big image time series.☆10Feb 25, 2026Updated 6 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆47Dec 4, 2025Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A tiny Python library for writing multi-channel TIFF stacks.☆31Updated this week
- A Python script used to stitch a two-dimensional grid of tiles into a mosaic☆31Jul 15, 2024Updated 2 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 5 months ago
- CytoData 2016 – origin story☆18Sep 15, 2017Updated 8 years ago
- Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy E…☆428Updated this week
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆58Apr 16, 2021Updated 5 years ago
- Read and write life sciences file formats☆144Jun 12, 2025Updated last year