DigitalSlideArchive / digital_slide_archive
The official deployment of the Digital Slide Archive and HistomicsTK.
☆110Updated last week
Related projects ⓘ
Alternatives and complementary repositories for digital_slide_archive
- A Girder plugin for pathology image annotations and analysis.☆57Updated this week
- An open-source digital pathology based rapid image annotation tool☆74Updated this week
- Delete the label from a whole-slide image☆58Updated 3 years ago
- 🔬 Code-free deep segmentation for computational pathology☆52Updated 5 months ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆29Updated 6 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆122Updated 5 months ago
- A Python library for deep learning on whole-slide images☆50Updated 3 years ago
- Python library for converting WSI files to DICOM☆62Updated this week
- ☆60Updated this week
- Whole Slide image (WSI) conversion for brightfield histology images☆33Updated this week
- PAthological QUpath Obsession - QuPath and Python conversations☆106Updated 4 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆93Updated this week
- Re-stained whole slide image alignment☆31Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆28Updated 10 months ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆65Updated last year
- Interoperable web-based slide microscopy viewer and annotation tool☆120Updated this week
- Pipeline for computational pathology☆34Updated 10 months ago
- ☆46Updated 2 years ago
- TiffSlide - cloud native openslide-python replacement based on tifffile☆86Updated 9 months ago
- ☆43Updated last year
- Histopathology Image Analysis☆91Updated last year
- Full package for applying deep learning to virtual slides.☆67Updated 6 years ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆22Updated 2 months ago
- Coincides with blogpost for using geojson and shapely☆29Updated 4 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆59Updated 4 months ago
- ☆53Updated 2 months ago
- QuPath extension for Segment Anything Model (SAM)☆92Updated 2 months ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆18Updated 7 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆49Updated 2 weeks ago
- ☆40Updated 2 years ago