DigitalSlideArchive / digital_slide_archiveLinks
The official deployment of the Digital Slide Archive and HistomicsTK.
☆127Updated this week
Alternatives and similar repositories for digital_slide_archive
Users that are interested in digital_slide_archive are comparing it to the libraries listed below
Sorting:
- A Girder plugin for pathology image annotations and analysis.☆74Updated this week
- Delete the label from a whole-slide image☆64Updated 4 years ago
- An open-source digital pathology based rapid image annotation tool☆82Updated last month
- ⚡ Open-source software for deep learning-based digital pathology☆137Updated last year
- 🔬 Code-free deep segmentation for computational pathology☆55Updated last year
- Python library for converting WSI files to DICOM☆76Updated 2 weeks ago
- Coincides with blogpost for using geojson and shapely☆33Updated 4 years ago
- Re-stained whole slide image alignment☆35Updated last year
- HistoQC is an open-source quality control tool for digital pathology slides☆305Updated last month
- PAthological QUpath Obsession - QuPath and Python conversations☆121Updated 2 weeks ago
- ☆73Updated 2 weeks ago
- A Python library for deep learning on whole-slide images☆53Updated 3 years ago
- ☆36Updated 5 months ago
- TiffSlide - cloud native openslide-python replacement based on tifffile☆103Updated 3 months ago
- AI-based pathology predicts origins for cancers of unknown primary - Nature☆174Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆69Updated 2 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆105Updated 9 months ago
- Python package for reading DICOM WSI file sets.☆44Updated last week
- A pipeline to segment tissue from the background in histological images☆69Updated 2 years ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆32Updated 9 months ago
- Virtual Alignment of pathoLogy Image Series☆174Updated 2 months ago
- QuPath extension for Segment Anything Model (SAM)☆117Updated last month
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆73Updated 8 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆36Updated last year
- Full package for applying deep learning to virtual slides.☆69Updated 7 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆36Updated last year
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆163Updated last year
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆210Updated 2 weeks ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆80Updated last year
- Whole Slide Digital Pathology Image Tissue Localization☆45Updated last year