DigitalSlideArchive / digital_slide_archiveLinks
The official deployment of the Digital Slide Archive and HistomicsTK.
☆133Updated last week
Alternatives and similar repositories for digital_slide_archive
Users that are interested in digital_slide_archive are comparing it to the libraries listed below
Sorting:
- A Girder plugin for pathology image annotations and analysis.☆78Updated 3 weeks ago
- Delete the label from a whole-slide image☆65Updated 4 years ago
- ⚡ Open-source software for deep learning-based digital pathology☆141Updated last year
- An open-source digital pathology based rapid image annotation tool☆90Updated last week
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- Coincides with blogpost for using geojson and shapely☆33Updated 5 years ago
- Python library for converting WSI files to DICOM☆80Updated last month
- ☆73Updated 3 weeks ago
- PAthological QUpath Obsession - QuPath and Python conversations☆133Updated 5 months ago
- HistoQC is an open-source quality control tool for digital pathology slides☆317Updated last month
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆76Updated last year
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆41Updated last month
- Re-stained whole slide image alignment☆36Updated 2 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆109Updated 2 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆84Updated last year
- AI-based pathology predicts origins for cancers of unknown primary - Nature☆179Updated 4 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated 2 years ago
- QuPath extension for Segment Anything Model (SAM)☆126Updated 6 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆37Updated 2 weeks ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆33Updated last year
- Virtual Alignment of pathoLogy Image Series☆203Updated 7 months ago
- A Python library for deep learning on whole-slide images☆52Updated 4 years ago
- TiffSlide - cloud native openslide-python replacement based on tifffile☆104Updated 8 months ago
- ☆36Updated 10 months ago
- A pipeline to segment tissue from the background in histological images☆72Updated 2 years ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆28Updated 2 months ago
- Full package for applying deep learning to virtual slides.☆72Updated 7 years ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Updated last year
- Pipeline for computational pathology☆37Updated 2 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆72Updated 3 years ago