Alternatives and similar repositories for stainlib

Users that are interested in stainlib are comparing it to the libraries listed below

• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆35Updated last year
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆54Updated last year
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆47Updated 2 months ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆30Updated last year
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆21Updated last year
• choosehappy / PatchSorter
  A tool for rapidly labeling objects using deep learning feature embedding
  ☆32Updated 9 months ago
• choosehappy / HoverFast
  Blazing fast nuclei segmentation for brightfield Whole Slide Images
  ☆35Updated 3 months ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆33Updated last year
• Path-AI / hif2gene
  Data and code to accompany our Nature publication
  ☆46Updated 3 years ago
• TissueImageAnalytics / iguana
  Interpretable Gland-Graph Networks
  ☆21Updated last year
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated last year
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆70Updated 10 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆53Updated 3 years ago
• kevindehaan / stain-transformation
  ☆40Updated 3 years ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆67Updated 2 years ago
• mahmoodlab / CRANE
  Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine
  ☆31Updated 3 years ago
• clemsgrs / hs2p
  Histopathology Slides Preprocessing Pipeline
  ☆38Updated 2 months ago
• lucasrla / wsi-preprocessing
  Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
  ☆54Updated last year
• huangzhii / IMPRESS
  ☆21Updated 2 years ago
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆67Updated 4 months ago
• stanfordmlgroup / DLBCL-Morph
  DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …
  ☆36Updated 4 years ago
• TissueImageAnalytics / TILAb-Score
  This repository contains the implementation of TILAb-score as described in the original paper.
  ☆18Updated 5 years ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated 2 months ago
• vqdang / H2T
  ☆35Updated 2 years ago
• alexjfoote / reetoolbox
  Toolbox for measuring adversarial robustness to many transforms
  ☆19Updated last month
• impromptuRong / hd_wsi
  ☆33Updated 2 months ago
• manuel-munoz-aguirre / PyHIST
  A pipeline to segment tissue from the background in histological images
  ☆69Updated 2 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆53Updated 11 months ago
• wenqi006 / SlideGraph
  ☆55Updated 3 years ago