Alternatives and similar repositories for PartSeg

Users that are interested in PartSeg are comparing it to the libraries listed below

• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆61Updated last year
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated this week
• hanjinliu / impy
  Speed up coding/extending image analysis in Python.
  ☆37Updated 2 weeks ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆90Updated last week
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆45Updated 9 months ago
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆49Updated this week
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated 6 months ago
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated last year
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆65Updated 3 weeks ago
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆55Updated 9 months ago
• allen-cell-animated / agave
  High quality visualization for volumetric image data
  ☆55Updated this week
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated last year
• lowe-lab-ucl / arboretum
  Track and lineage visualization with btrack and Napari
  ☆45Updated 4 months ago
• haesleinhuepf / the-segmentation-game
  Gamified image segmentation quality estimation
  ☆19Updated 9 months ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆59Updated 6 months ago
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆28Updated last year
• napari / cookiecutter-napari-plugin
  Cookiecutter for napari plugins
  ☆71Updated last year
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆22Updated 7 months ago
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆43Updated 2 weeks ago
• haesleinhuepf / devbio-napari
  ☆51Updated 9 months ago
• napari / napari-plugin-template
  A template repo used to make new napari plugins
  ☆31Updated last week
• AllenCellModeling / napari-aicsimageio
  Multiple file format reading directly into napari using pure Python
  ☆39Updated 3 months ago
• haesleinhuepf / napari-assistant
  ☆33Updated 9 months ago
• brisvag / napari-label-interpolator
  ☆13Updated 2 years ago
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆25Updated 10 months ago
• morphometrics / morphometrics
  ☆22Updated 2 years ago
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated last year
• haesleinhuepf / awesome-napari-plugins-that-are-not-on-the-napari-hub-yet
  ☆25Updated 2 years ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆24Updated 10 months ago