HistoQC is an open-source quality control tool for digital pathology slides
☆329Aug 28, 2026Updated last week
Alternatives and similar repositories for HistoQC
Users that are interested in HistoQC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Intelligent data partitioning using quality control metrics☆18Jun 10, 2025Updated last year
- A Python toolkit for pathology image analysis algorithms.☆487Aug 13, 2026Updated 3 weeks ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆273Dec 23, 2023Updated 2 years ago
- Open source tools for computational pathology - Nature BME☆1,728Apr 14, 2025Updated last year
- An open-source digital pathology based rapid image annotation tool☆92Aug 21, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Pipeline for computational pathology☆45Jan 4, 2024Updated 2 years ago
- Tools for tissue image stain normalisation and augmentation in Python 3☆347May 8, 2021Updated 5 years ago
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆742Oct 27, 2023Updated 2 years ago
- Library for Digital Pathology Image Processing☆464Aug 31, 2026Updated last week
- ☆349Nov 21, 2021Updated 4 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Oct 3, 2023Updated 2 years ago
- Program for the analysis and visualization of whole-slide images in digital pathology☆686Sep 12, 2023Updated 2 years ago
- A tool for rapidly labeling objects using deep learning feature embedding☆36Updated this week
- The official deployment of the Digital Slide Archive and HistomicsTK.☆141Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆548Updated this week
- A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge☆212Mar 7, 2019Updated 7 years ago
- An implementation of Unet for pytorch designed for digital pathology segmentation☆128Aug 23, 2022Updated 4 years ago
- Stain normalization tools for histological analysis and computational pathology☆190Nov 13, 2025Updated 9 months ago
- Fusing Histology and Genomics via Deep Learning - IEEE TMI☆327Aug 22, 2022Updated 4 years ago
- Tools for computational pathology☆462Aug 14, 2026Updated 3 weeks ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆39Jan 25, 2024Updated 2 years ago
- QuPath - Open-source bioimage analysis for research☆1,436Updated this week
- Delete the label from a whole-slide image☆66Mar 18, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆119Nov 8, 2025Updated 9 months ago
- Powerful, open-source AI tools for digital pathology.☆374May 7, 2026Updated 4 months ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆56Jun 20, 2023Updated 3 years ago
- Python modules to work with large multiresolution images.☆218Updated this week
- Digital Pathology Whole Slide Image Analysis Toolbox☆54Apr 2, 2023Updated 3 years ago
- Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell☆251Feb 7, 2023Updated 3 years ago
- Python Whole Slide Image Preprocessing☆303Nov 15, 2022Updated 3 years ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Apr 29, 2024Updated 2 years ago
- A Python package for tissue and pen marking segmentation on low-magnification (1.25x) whole slide images.☆18Feb 2, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- List of academic institutes/companies working on computer-based digital pathology image analysis☆46Jul 17, 2026Updated last month
- TiffSlide - cloud native openslide-python replacement based on tifffile☆107Jul 3, 2026Updated 2 months ago
- ☆75Sep 23, 2024Updated last year
- Toolbox for measuring adversarial robustness to many transforms☆19Apr 24, 2025Updated last year
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆18Jun 15, 2023Updated 3 years ago
- GPU-accelerated Stain Normalization and Augmentation in PyTorch☆46Feb 10, 2026Updated 6 months ago
- Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma sli…☆517Jun 7, 2024Updated 2 years ago