choosehappy / CohortFinderLinks
Intelligent data partitioning using quality control metrics
☆19Updated 5 months ago
Alternatives and similar repositories for CohortFinder
Users that are interested in CohortFinder are comparing it to the libraries listed below
Sorting:
- A tool for rapidly labeling objects using deep learning feature embedding☆34Updated 2 months ago
- An open-source digital pathology based rapid image annotation tool☆87Updated last week
- ☆46Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆84Updated last year
- Delete the label from a whole-slide image☆65Updated 4 years ago
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆22Updated 4 years ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆26Updated 4 months ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆40Updated 2 months ago
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Updated 4 years ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆23Updated 5 years ago
- Python 3 library for the augmentation & normalization of H&E images☆61Updated 3 years ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆43Updated 3 months ago
- Data and code to accompany our Nature publication☆47Updated 3 years ago
- A Python library for deep learning on whole-slide images☆53Updated 4 years ago
- Coincides with blogpost for using geojson and shapely☆33Updated 5 years ago
- A set of codes to classify H&E slides using deep learning☆29Updated 3 years ago
- Solid Tumor Associative Modeling in Pathology☆98Updated last week
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆12Updated 2 years ago
- This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…☆34Updated 10 months ago
- GrandQC tool for tissue detection and quality control in pathology☆75Updated 8 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆74Updated 9 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated last week
- Evaluation framework for oncology foundation models (FMs)☆137Updated this week
- ☆20Updated 2 years ago
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆24Updated 3 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- ☆49Updated 3 years ago
- Pipeline for computational pathology☆38Updated last year