Intelligent data partitioning using quality control metrics
☆18Jun 10, 2025Updated last year
Alternatives and similar repositories for CohortFinder
Users that are interested in CohortFinder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for rapidly labeling objects using deep learning feature embedding☆35Jul 1, 2026Updated last week
- Med-NCA: Robust and Lightweight Segmentation with Neural Cellular Automata☆13Jun 2, 2023Updated 3 years ago
- An open-source digital pathology based rapid image annotation tool☆90Jun 22, 2026Updated 2 weeks ago
- HistoQC is an open-source quality control tool for digital pathology slides☆327Apr 13, 2026Updated 2 months ago
- Pipeline for computational pathology☆41Jan 4, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Hover-net for nuclei instance segmentation and classification☆17Feb 15, 2022Updated 4 years ago
- The repository provide augment function of "Stain mix-up: Unsupervised domain generalization for histopathology images"☆12Feb 22, 2022Updated 4 years ago
- Python package for reading DICOM WSI file sets.☆51Jun 26, 2026Updated last week
- Awesome Domain Generalization for Computational Pathology☆24Nov 7, 2024Updated last year
- A whole-slide image reader for TensorFlow☆25Jun 22, 2026Updated 2 weeks ago
- QuPath extension to run StarDist nucleus detection☆48Jun 25, 2026Updated 2 weeks ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆39Feb 6, 2026Updated 5 months ago
- Lab for quantitative bioimage analysis experiments in Python☆20Feb 16, 2026Updated 4 months ago
- A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.☆18Jun 2, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Trained models for use with QuPath☆16Jun 25, 2026Updated last week
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆20Updated this week
- PathBench-MIL: A comprehensive, flexible Benchmarking / AutoML framework for multiple instance learning in Histopathology☆29Jan 9, 2026Updated 6 months ago
- torchlogic is a pytorch framework for developing Neuro-Symbolic AI systems and implements Neural Reasoning Networks.☆21Sep 18, 2025Updated 9 months ago
- SlideRunner is a tool for massive cell annotations in whole slide images☆80Jul 29, 2025Updated 11 months ago
- Ahcore is the AI for Oncology core computational pathology toolkit☆17Oct 3, 2024Updated last year
- https://www.translation.manchester.ac.uk/training/☆15Nov 8, 2023Updated 2 years ago
- SegmentationDataset class for torchvision. Applies data augmentation to both images and segmentations.☆12Mar 21, 2022Updated 4 years ago
- ☆27May 15, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆537Jun 29, 2026Updated last week
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆21Mar 25, 2022Updated 4 years ago
- ☆23Jun 18, 2023Updated 3 years ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆271Dec 23, 2023Updated 2 years ago
- ☆16Jan 18, 2023Updated 3 years ago
- ☆72Jun 15, 2021Updated 5 years ago
- QuPath documentation☆22Mar 2, 2026Updated 4 months ago
- ☆20Apr 24, 2026Updated 2 months ago
- Python tool for stitching histopathology tissue fragments into artificial whole-mounts.☆23Dec 5, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆24Feb 8, 2022Updated 4 years ago
- A Binder-compatibible repo with a Dockerfile☆11Aug 18, 2017Updated 8 years ago
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆59Apr 16, 2021Updated 5 years ago
- CDSeq R Package☆21Jul 1, 2025Updated last year
- describing the FISMA Ready project and its goals☆12Mar 20, 2019Updated 7 years ago
- Prostate gland segmentation with deep Convolutional Neural Networks☆10May 29, 2017Updated 9 years ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 7 months ago