Alternatives and similar repositories for anonymize-slide

Users that are interested in anonymize-slide are comparing it to the libraries listed below

• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆130Updated last week
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆74Updated last week
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆138Updated last year
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆86Updated 2 weeks ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆56Updated last year
• imi-bigpicture / wsidicom
  Python package for reading DICOM WSI file sets.
  ☆45Updated 3 weeks ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated last week
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆33Updated 4 years ago
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆36Updated last year
• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆78Updated last week
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆54Updated 3 years ago
• zhaoxuanma / Deeplearning-digital-pathology
  Full package for applying deep learning to virtual slides.
  ☆71Updated 7 years ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆38Updated last year
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆32Updated 10 months ago
• choosehappy / HistoQC
  HistoQC is an open-source quality control tool for digital pathology slides
  ☆306Updated 2 months ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆35Updated 2 years ago
• mahmoodlab / TOAD
  AI-based pathology predicts origins for cancers of unknown primary - Nature
  ☆175Updated 3 years ago
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆70Updated 7 months ago
• Booritas / slideio
  ☆72Updated last month
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆73Updated 9 months ago
• PingjunChen / tissueloc
  Whole Slide Digital Pathology Image Tissue Localization
  ☆45Updated 2 years ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆107Updated this week
• manuel-munoz-aguirre / PyHIST
  A pipeline to segment tissue from the background in histological images
  ☆70Updated 2 years ago
• impromptuRong / hd_wsi
  ☆36Updated 7 months ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• lucasrla / wsi-tile-cleanup
  Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning
  ☆28Updated 5 years ago
• ysbecca / py-wsi
  Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…
  ☆164Updated last year
• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆26Updated 3 months ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆69Updated 2 years ago
• SarderLab / extract-xml-region
  A code for extracting annotated regions from whole slide images (WSIs) anotated in Aperio Imagescope
  ☆12Updated 5 years ago