moeinzadeh / Ranbow
☆10Updated 3 years ago
Alternatives and similar repositories for Ranbow:
Users that are interested in Ranbow are comparing it to the libraries listed below
- Likelihood-based Selective Sweep Detection☆37Updated last year
- Population genetics analyses from NGS data☆25Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆26Updated 6 years ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- ☆42Updated 11 months ago
- ☆27Updated 4 months ago
- Genome Annotation Pipeline☆35Updated 8 months ago
- ☆21Updated 5 years ago
- read and analyse RepeatMasker output☆24Updated last year
- ☆43Updated 8 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆18Updated 5 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆38Updated 7 months ago
- Tutorial on using popular tools for learning about population history☆50Updated 6 years ago
- ☆16Updated 6 months ago
- A box of genomics tools☆21Updated 4 years ago
- Sex assignment through coverage☆17Updated last year
- Chromosome-level synteny plotting using orthologous regions☆29Updated 7 months ago
- TGS scaffolding☆46Updated 3 years ago
- Calculate circos format data of GC content and GC skew from genome data.☆11Updated 10 years ago
- Python wrappers for programs that search for transposable elements☆19Updated 8 years ago
- A simple program for evaluate the assembly of a give genome.☆18Updated 2 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆33Updated last year
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- scripts to parse and analyse MCScanX collinearity output☆31Updated 5 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆54Updated this week
- ☆24Updated 7 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆33Updated 6 years ago
- ☆29Updated last year
- A shiny application to visualize MCscan result☆36Updated 2 years ago