☆10Nov 4, 2021Updated 4 years ago
Alternatives and similar repositories for Ranbow
Users that are interested in Ranbow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Removing PCR duplicates for sequencing reads.☆14Sep 8, 2020Updated 5 years ago
- ☆12Aug 23, 2023Updated 2 years ago
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated last year
- Contig Ploidy and Allele Dosage Estimation☆11Oct 30, 2015Updated 10 years ago
- HybSeq Target Capture of 353 Protein Coding Genes in Any Angiosperm☆21Feb 5, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Pipeline for phasing sequence data in polyploids. Designed for target enrichment data, but probably works with other data too.☆12Jun 20, 2024Updated last year
- Mabs, a genome assembly tool that optimizes parameters of Hifiasm and Flye☆35Mar 5, 2026Updated 3 weeks ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆83Dec 3, 2025Updated 3 months ago
- base-level dotplots from PAF alignments☆33Sep 18, 2025Updated 6 months ago
- De novo genome assembler.☆11Jul 30, 2018Updated 7 years ago
- Python Breeding Optimizer and Simulator: A Python library for simulating and optimizing breeding pipelines.☆11Dec 10, 2024Updated last year
- ☆10Sep 4, 2025Updated 6 months ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- ☆34Mar 2, 2023Updated 3 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Plann: a command-line application for annotating plastome sequences☆12Aug 5, 2022Updated 3 years ago
- Added functions for Echidna in R☆11Apr 14, 2023Updated 2 years ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Jun 12, 2024Updated last year
- Close assembly gaps using long-reads at high accuracy.☆51Feb 20, 2024Updated 2 years ago
- A mosaic genome painting tool for plant genomes☆18Mar 4, 2025Updated last year
- An R package for predicting ploidal level from sequence data using site-based heterozygosity☆18Feb 19, 2026Updated last month
- Using genome-wide markers for polyploid breeding☆12Mar 22, 2026Updated last week
- Visualise interstrain recombination from environmental samples.☆27Apr 18, 2019Updated 6 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆72Sep 10, 2025Updated 6 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- CPANG19 - Computational PANGenomics (2019)☆12May 7, 2020Updated 5 years ago
- An accurate and ultra-fast adapter and quality trimming program for Illumina Next-Generation Sequencing (NGS) data.☆38Oct 9, 2025Updated 5 months ago
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆26Jun 13, 2024Updated last year
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆15Sep 17, 2025Updated 6 months ago
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆24Nov 25, 2024Updated last year
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆18Jan 12, 2026Updated 2 months ago
- Northern Arizona SNP Pipeline☆20Oct 29, 2024Updated last year
- QTL analysis in diallel populations☆12Mar 13, 2026Updated 2 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Python implementation of barrnap (Bacterial ribosomal RNA predictor)☆26Jan 25, 2025Updated last year
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- An Example of Subgenome Phasing for Complex Allopolyploidy☆15Nov 6, 2025Updated 4 months ago
- Basic Tools for the Analysis of Disease Outbreaks☆12Oct 24, 2019Updated 6 years ago
- Adaptive haplotype assembly for efficiently leveraging high coverage in long reads☆13Sep 4, 2018Updated 7 years ago
- Generating UTRs from SHort Reads☆11Sep 28, 2020Updated 5 years ago
- MIPS multicycle datapath made in logisim evolution.☆12May 20, 2024Updated last year