Convert genbank files to a swath of other formats
☆32Aug 9, 2026Updated 2 months ago
Alternatives and similar repositories for genbank_to
Users that are interested in genbank_to are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Apr 20, 2026Updated 6 months ago
- codoff: a program to measure the irregularity of the codon usage for a single genomic region (e.g. a BGC, prophage, etc.) relative to the…☆13Jan 19, 2026Updated 9 months ago
- ☆16Jul 24, 2026Updated 3 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆73Aug 27, 2026Updated 2 months ago
- 🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs☆67Aug 28, 2026Updated 2 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A user-friendly tool to screen antimicrobial resistance in fungal genomes☆21May 8, 2026Updated 5 months ago
- ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs☆37Oct 24, 2025Updated last year
- Assembling phage particles one protein at a time☆27Aug 3, 2026Updated 3 months ago
- Sequence-independent identification and removal of adapters/systemic contamination in shotgun sequencing data. https://doi.org/10.1093/bi…☆19Apr 4, 2023Updated 3 years ago
- Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.☆130Oct 22, 2026Updated 2 weeks ago
- PyO3 bindings and Python interface to sylph, an ultrafast method for containment ANI querying and taxonomic profiling.☆20Sep 1, 2026Updated 2 months ago
- NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV)☆22May 3, 2025Updated last year
- Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…☆16May 24, 2023Updated 3 years ago
- Trim lots of metagenomics samples all at once☆10May 2, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.☆25Nov 25, 2025Updated 11 months ago
- ☆11Mar 5, 2025Updated last year
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆28Feb 12, 2026Updated 8 months ago
- 🛠️🧬 A Software Framework to Manipulate Assembly Graphs☆22Updated this week
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆47Feb 17, 2021Updated 5 years ago
- Jaeger is a quick and precise tool for detecting viruses in sequence assemblies.☆11Oct 14, 2026Updated 3 weeks ago
- Fast, highly accurate, read-trimming for NGS data.☆26Oct 20, 2026Updated 2 weeks ago
- A tool to measure bacteriophages plaque sizes☆17May 12, 2023Updated 3 years ago
- A high-resolution long-read metagenome assembler for even noisy reads. Myloasm assembles strain-resolved, circular + complete genomes fro…☆176Oct 11, 2026Updated 3 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Wrapper for short and long read mapping, creation of quality report(s) and estimation of genome size☆12Sep 30, 2025Updated last year
- ☆102Apr 5, 2026Updated 7 months ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆246Oct 8, 2026Updated 3 weeks ago
- Vanjari is a tool for the classification of viruses using neural networks☆14Nov 21, 2025Updated 11 months ago
- a quality control tool for bacterial ONT-only assemblies☆18Oct 19, 2026Updated 2 weeks ago
- Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.☆159Updated this week
- Genome size estimation from long read overlaps