linsalrob / genbank_toLinks
Convert genbank files to a swath of other formats
☆18Updated last year
Alternatives and similar repositories for genbank_to
Users that are interested in genbank_to are comparing it to the libraries listed below
Sorting:
- Find Unique genomic Regions☆29Updated 2 months ago
- Genome size estimation from long read overlaps☆56Updated last month
- Phasing for metagenomics using PacBio long reads☆17Updated 3 years ago
- SHOOT.bio - the phylogenetic search engine☆24Updated 2 years ago
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated last year
- Fast and space-efficient taxonomic classification of long reads☆43Updated 3 weeks ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆23Updated last year
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- Prokaryotic Pangenome Analysis☆24Updated 3 years ago
- OPAL: Open-community Profiling Assessment tooL☆28Updated 4 months ago
- Bacterial GWAS analysis☆40Updated last week
- Strain-level haplotyping for metagenomes with short or long-reads.☆51Updated last month
- Strain Resolution ON Graphs☆47Updated last year
- ☆27Updated 3 years ago
- Colinear block visualisation tool☆31Updated last year
- Phylogenetic compression of extremely large genome collections [661k ↘𝟭𝟲𝗚𝗶𝗕 | BIGSIdata ↘𝟰𝟴𝗚𝗶𝗕 | AllTheBact'23 ↘𝟳𝟱𝗚𝗶𝗕]☆33Updated 2 months ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆32Updated last month
- k-mer based Pipeline to identify the Serotype from Illumina NGS reads☆23Updated last year
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆31Updated 10 months ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated last year
- Microbial agile accurate SNP Typer☆29Updated last year
- MIRA sequence assembler☆29Updated 5 months ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- transposable element typing pipeline☆18Updated last year
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆26Updated 5 years ago
- Toolkit for establishing, updating, and validating GTDB species clusters☆21Updated last month